scPDB - Distribution of Binding site Similarity values of 4j16 entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
4j16	NAD	NAD/NADP transhydrogenase alpha subunit 1

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
4j16	NAD	NAD/NADP transhydrogenase alpha subunit 1	/	1.000
4j1t	NAD	NAD/NADP transhydrogenase alpha subunit 1	/	0.561
1hzz	NAD	NAD(P) transhydrogenase subunit alpha part 1	1.6.1.2	0.473
4cr8	NAD	N-acylmannosamine 1-dehydrogenase	1.1.1.233	0.473
4l4s	NAI	L-lactate dehydrogenase A chain	1.1.1.27	0.471
2fsv	NAD	NAD(P) transhydrogenase subunit alpha part 1	1.6.1.2	0.468
2d1y	NAD	Oxidoreductase, short-chain dehydrogenase/reductase family	/	0.459
4idg	NAD	Putative UDP-glucose 4-epimerase	/	0.459
1u28	NAD	NAD(P) transhydrogenase subunit alpha part 1	1.6.1.2	0.458
4fw8	NAI	3-oxoacyl-(Acyl-carrier-protein) reductase	/	0.456
2oor	NAD	NAD(P) transhydrogenase subunit alpha part 1	1.6.1.2	0.455
1ptj	SND	NAD(P) transhydrogenase subunit alpha part 1	1.6.1.2	0.445
4nd2	A3D	Lactate dehydrogenase, adjacent gene encodes predicted malate dehydrogenase	/	0.444
4yr9	NAD	L-threonine 3-dehydrogenase, mitochondrial	1.1.1.103	0.440