Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
4ivq | I43 | Thymidine kinase |
PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
---|---|---|---|---|---|
4ivq | I43 | Thymidine kinase | / | 1.000 | |
4ivr | N50 | Thymidine kinase | / | 0.634 | |
1e2n | RCA | Thymidine kinase | / | 0.519 | |
1e2j | THM | Thymidine kinase | / | 0.518 | |
1e2k | TMC | Thymidine kinase | / | 0.493 | |
1p7c | T5A | Thymidine kinase | / | 0.489 | |
1e2l | TMC | Thymidine kinase | / | 0.471 | |
4jbx | SK7 | Thymidine kinase | / | 0.467 | |
1u0h | ONM | Adenylate cyclase type 2 | / | 0.442 | |
1u0h | ONM | Adenylate cyclase type 5 | / | 0.442 |