scPDB - Distribution of Binding site Similarity values of 4ivo entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
4ivo	ACJ	Protoporphyrinogen oxidase	1.3.3.4

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
4ivo	ACJ	Protoporphyrinogen oxidase	1.3.3.4	1.000
3nks	ACJ	Protoporphyrinogen oxidase	1.3.3.4	0.618
1tll	NAP	Nitric oxide synthase, brain	1.14.13.39	0.463
4nmd	FDA	Bifunctional protein PutA	/	0.455
4b69	FAD	L-ornithine N(5)-monooxygenase	/	0.449
1p9w	ANP	Type II secretion system protein E	/	0.446
2cf6	NAP	Cinnamyl alcohol dehydrogenase 5	1.1.1.195	0.444