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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4isg1FYGlucokinase2.7.1.2

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
4isg1FYGlucokinase2.7.1.21.000
4ise1FWGlucokinase2.7.1.20.598
4isf1FXGlucokinase2.7.1.20.578
4dch4DCGlucokinase2.7.1.20.567
4dhyS41Glucokinase2.7.1.20.502
4mleVO1Glucokinase2.7.1.20.495
3h1vTK1Glucokinase2.7.1.20.482
3a0iAJIGlucokinase2.7.1.20.481
3vf60H6Glucokinase2.7.1.20.479
2qimZEAClass 10 plant pathogenesis-related protein/0.477
3s41S41Glucokinase2.7.1.20.459
3a1cACPProbable copper-exporting P-type ATPase A3.6.3.540.458
1xddAAYIntegrin alpha-L/0.455
3gncQQQGlutaryl-CoA dehydrogenase/0.453
3h3r14HCollagen type IV alpha-3-binding protein/0.453
3h3sH15Collagen type IV alpha-3-binding protein/0.452
2xviFADPutative flavin-containing monooxygenase/0.450
1q0zAKAAclacinomycin methylesterase RdmC3.1.1.950.448
4ixc1JDGlucokinase2.7.1.20.447
3id8MRKGlucokinase2.7.1.20.446
4iwv1J9Glucokinase2.7.1.20.445
1xdsDRAAclacinomycin 10-hydroxylase RdmB4.1.10.444
3imxB84Glucokinase2.7.1.20.442
1nytNAPShikimate dehydrogenase (NADP(+))/0.441
3vev0H4Glucokinase2.7.1.20.441