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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4iakADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.11

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
4iakADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.111.000
4iazADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.632
4iayADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.627
3x2vATPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.518
1jbpADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.503
2uzuL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.501
3e8cG96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.498
2gu8796cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.496
4xw4ANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.493
3x2wATPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.490
1ydtIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.487
2f7e2EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.486
3x2uATPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.484
2uw0GVKcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.482
4iacACPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.481
2uzvSS5cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.477
3i4bZ48Glycogen synthase kinase-3 beta2.7.11.260.475
1bx6BA1cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.474
3e8eG98cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.474
2uzwSS4cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.472
2vo7M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.467
4ekkANPRAC-alpha serine/threonine-protein kinase2.7.11.10.464
2f7z6EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.462
3kkvB99cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.461
2jdsL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.460
2oh02PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.457
3idbANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.456
3ow3SMYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.451
1q8tY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.447
3o7lANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.445
4dh5ADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.445
4qnyANPMitogen activated protein kinase, putative/0.444
1j1bANPGlycogen synthase kinase-3 beta2.7.11.260.443
2ojf4PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.443