scPDB - Distribution of Binding site Similarity values of 4h0n entry / Site 3

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
4h0n	SAH	Dnmt2

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
4h0n	SAH	Dnmt2	/	1.000
3qv2	SAH	5-cytosine DNA methyltransferase	/	0.471
7mht	SAH	Modification methylase HhaI	2.1.1.37	0.454
3pt9	SAH	DNA (cytosine-5)-methyltransferase 1	2.1.1.37	0.451
8mht	SAH	Modification methylase HhaI	2.1.1.37	0.449
4wxx	SAH	DNA (cytosine-5)-methyltransferase 1	2.1.1.37	0.442
3pt6	SAH	DNA (cytosine-5)-methyltransferase 1	2.1.1.37	0.441
2zcj	SAH	Modification methylase HhaI	2.1.1.37	0.440
4kzo	NAP	Isocitrate dehydrogenase [NADP] cytoplasmic	1.1.1.42	0.440
5mht	SAH	Modification methylase HhaI	2.1.1.37	0.440