Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
4fqf | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 |
PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
---|---|---|---|---|---|
4fqf | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 1.000 | |
1o00 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.631 | |
1o04 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.599 | |
1o01 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.597 | |
2onp | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.590 | |
1cw3 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.583 | |
3n82 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.565 | |
4fr8 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.555 | |
1nzw | NAI | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.550 | |
1nzz | NAI | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.545 | |
1o02 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.534 | |
4pz2 | NAD | Aldehyde dehydrogenase 2-6 | / | 0.533 | |
2onm | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.527 | |
2bhp | NAD | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.524 | |
4v37 | NAD | Betaine aldehyde dehydrogenase, chloroplastic | 1.2.1.8 | 0.499 | |
3iwk | NAD | Aminoaldehyde dehydrogenase | / | 0.478 | |
2j5n | NAD | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.477 | |
4pt0 | NAD | Aldehyde dehydrogenase | / | 0.474 | |
2ehq | NAP | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.473 | |
2ehu | NAD | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.472 | |
2eii | NAD | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.469 | |
4fr8 | ADP | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.467 | |
2j40 | NAD | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.466 | |
4pxl | NAD | Aldehyde dehydrogenase3 | / | 0.466 | |
4zz7 | NAD | Methylmalonate-semialdehyde dehydrogenase | / | 0.462 | |
1nzx | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.459 | |
1bxs | NAD | Retinal dehydrogenase 1 | 1.2.1.36 | 0.449 | |
4x4l | NAI | Retinal dehydrogenase 1 | 1.2.1.36 | 0.449 |