Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 4ffl | ADP | Uncharacterized protein |
| PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
|---|---|---|---|---|---|
| 4ffl | ADP | Uncharacterized protein | / | 1.000 | |
| 4ffr | ATP | Uncharacterized protein | / | 0.714 | |
| 4ffm | ADP | Uncharacterized protein | / | 0.547 | |
| 1pk8 | ATP | Synapsin-1 | / | 0.452 | |
| 3af4 | GCP | Pantothenate kinase | 2.7.1.33 | 0.451 | |
| 2zsb | ADP | Pantothenate kinase | 2.7.1.33 | 0.450 | |
| 3akk | ADP | Serine/threonine-protein kinase CtkA | 2.7.11.1 | 0.442 | |
| 2z4s | ADP | Chromosomal replication initiator protein DnaA | / | 0.440 | |
| 3hu1 | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.440 | |
| 4nh8 | 2LC | Heat shock protein HSP 90-alpha | / | 0.440 |