scPDB - Distribution of Binding site Similarity values of 4dy4 entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
4dy4	FMN	NAD(P)H dehydrogenase (quinone)

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
4dy4	FMN	NAD(P)H dehydrogenase (quinone)	/	1.000
3zho	FMN	NAD(P)H dehydrogenase (quinone)	/	0.697
2r97	FMN	NAD(P)H dehydrogenase (quinone)	/	0.605
2r96	FMN	NAD(P)H dehydrogenase (quinone)	/	0.578
5f12	FMN	NAD(P)H dehydrogenase (quinone)	/	0.546
3g5m	FAD	Ribosyldihydronicotinamide dehydrogenase [quinone]	/	0.446