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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4dvi2IWTankyrase-12.4.2.30

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
4dvi2IWTankyrase-12.4.2.301.000
4k4fK4FTankyrase-12.4.2.300.554
4n4v2GYTankyrase-12.4.2.300.542
4k4eK4ETankyrase-12.4.2.300.540
4bfpSWYTankyrase-22.4.2.300.533
4i9i1DYTankyrase-12.4.2.300.522
4msg2C6Tankyrase-12.4.2.300.493
4li81XQTankyrase-12.4.2.300.486
4n4t2GVTankyrase-12.4.2.300.485
4mt92D6Tankyrase-12.4.2.300.478
3u9y09LTankyrase-22.4.2.300.470
4bj9UHBTankyrase-22.4.2.300.470
4hyf1AKTankyrase-22.4.2.300.468
4li71XPTankyrase-12.4.2.300.465
4n3r2GUTankyrase-12.4.2.300.444
2fm5M99cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.443