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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4cpdNADAlcohol dehydrogenase

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
4cpdNADAlcohol dehydrogenase/1.000
2oxiNADAlcohol dehydrogenase E chain1.1.1.10.522
1ht0NADAlcohol dehydrogenase 1C1.1.1.10.520
2ohxNADAlcohol dehydrogenase E chain1.1.1.10.516
4nfhNAJAlcohol dehydrogenase E chain1.1.1.10.515
1ma0NADAlcohol dehydrogenase class-31.1.1.10.513
4dwvNAJAlcohol dehydrogenase E chain1.1.1.10.513
1hszNADAlcohol dehydrogenase 1B1.1.1.10.512
1adcPADAlcohol dehydrogenase E chain1.1.1.10.502
1a71NADAlcohol dehydrogenase E chain1.1.1.10.493
4ng5NAJAlcohol dehydrogenase E chain1.1.1.10.492
1axgNADAlcohol dehydrogenase E chain1.1.1.10.488
1axeNADAlcohol dehydrogenase E chain1.1.1.10.485
1u3vNADAlcohol dehydrogenase 1B1.1.1.10.484
1ldeNADAlcohol dehydrogenase E chain1.1.1.10.482
4c4oNADSADH/0.482
1hldNADAlcohol dehydrogenase E chain1.1.1.10.479
4dlbNADS-(hydroxymethyl)glutathione dehydrogenase/0.478
1agnNADAlcohol dehydrogenase class 4 mu/sigma chain1.1.1.10.477
1mgoNADAlcohol dehydrogenase E chain1.1.1.10.475
1adbCNDAlcohol dehydrogenase E chain1.1.1.10.474
2jhfNADAlcohol dehydrogenase E chain1.1.1.10.469
1cdoNADAlcohol dehydrogenase 11.1.1.10.468
1e3lNADAlcohol dehydrogenase 41.1.1.10.465
4gl4NAIAlcohol dehydrogenase class-3/0.458
5cdsNAJAlcohol dehydrogenase E chain1.1.1.10.452
2xaaNADSecondary alcohol dehydrogenase/0.445
1f8fNADBenzyl alcohol dehydrogenase/0.444
3jv7NADSecondary alcohol dehydrogenase/0.444
1kolNADGlutathione-independent formaldehyde dehydrogenase/0.442
4jjiNADAlcohol dehydrogenase class-3/0.442
1hetNADAlcohol dehydrogenase E chain1.1.1.10.441
4dl9NADS-(hydroxymethyl)glutathione dehydrogenase/0.441
4xd2NAIAlcohol dehydrogenase E chain1.1.1.10.440