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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4coxIMNProstaglandin G/H synthase 21.14.99.1

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
4coxIMNProstaglandin G/H synthase 21.14.99.11.000
3rr3FLRProstaglandin G/H synthase 21.14.99.10.589
3ntgD72Prostaglandin G/H synthase 21.14.99.10.576
3ln1CELProstaglandin G/H synthase 21.14.99.10.555
4fm5DF0Prostaglandin G/H synthase 21.14.99.10.545
2oyeIM8Prostaglandin G/H synthase 11.14.99.10.531
6coxS58Prostaglandin G/H synthase 21.14.99.10.530
3q7dNPXProstaglandin G/H synthase 21.14.99.10.510
2oyuIMSProstaglandin G/H synthase 11.14.99.10.503
3pghFLPProstaglandin G/H synthase 21.14.99.10.500
3mqe416Prostaglandin G/H synthase 21.14.99.10.495
4rrxLURProstaglandin G/H synthase 21.14.99.10.490
3n8wFLPProstaglandin G/H synthase 11.14.99.10.472
1ht834CProstaglandin G/H synthase 11.14.99.10.469
1eqgIBPProstaglandin G/H synthase 11.14.99.10.465
1eqhFLPProstaglandin G/H synthase 11.14.99.10.465
2aylFLPProstaglandin G/H synthase 11.14.99.10.454
4ph9IBPProstaglandin G/H synthase 21.14.99.10.451
3kk6CELProstaglandin G/H synthase 11.14.99.10.447
4otyLURProstaglandin G/H synthase 21.14.99.10.446
3n8xNIMProstaglandin G/H synthase 11.14.99.10.441