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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4bzcT8TDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.5

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
4bzcT8TDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.51.000
4tnyDTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.593
4qfyDGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.570
4to6DTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.569
4qfxDTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.504