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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4bzbDGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.5

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
4bzbDGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.51.000
4qg1DTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.604
4to3DCPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.525
4qg0DUTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.516
4tnyDGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.495
4qfxDGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.493
4to6TTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.485
4to4DCPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.484
4qfyDCPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.482
4zweDGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.479
4qfzTTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.477
4rxsTTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.459
4to5DCPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.459
4to1DCPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.449