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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4bfxZVXPantothenate kinase2.7.1.33

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
4bfxZVXPantothenate kinase2.7.1.331.000
4bftZVTPantothenate kinase2.7.1.330.706
4bfsZVSPantothenate kinase2.7.1.330.662
2geuCOKPantothenate kinase2.7.1.330.603
4bfwZVWPantothenate kinase2.7.1.330.590
2getCOKPantothenate kinase2.7.1.330.589
2zsdCOAPantothenate kinase2.7.1.330.586
4bfvZVVPantothenate kinase2.7.1.330.582
2gevCOKPantothenate kinase2.7.1.330.572
2gesCOKPantothenate kinase2.7.1.330.560
1esmCOAPantothenate kinase2.7.1.330.527
4bfuZVUPantothenate kinase2.7.1.330.488
4bfzZVZPantothenate kinase2.7.1.330.487
3af2ACPPantothenate kinase2.7.1.330.445
2zsbADPPantothenate kinase2.7.1.330.441
3af4GCPPantothenate kinase2.7.1.330.440