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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4b734VAGenome polyprotein3.4.21.98

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
4b734VAGenome polyprotein3.4.21.981.000
4b71DJLGenome polyprotein3.4.21.980.622
4b754VAGenome polyprotein3.4.21.980.584
4b741LHGenome polyprotein3.4.21.980.542
4b76PW1Genome polyprotein3.4.21.980.453