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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4af7FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.2

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
4af7FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.21.000
3vo2FADFerredoxin--NADP reductase/0.594
3mhpFADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.593
1bx1FADFerredoxin--NADP reductase, chloroplastic1.18.1.20.579
1fnbFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.577
2b5oFADFerredoxin--NADP reductase1.18.1.20.571
1gawFADFerredoxin/0.556
1fncFDAFerredoxin--NADP reductase, chloroplastic1.18.1.20.531
1sm4FADFerredoxin--NADP reductase/0.529
1gaqFADFerredoxin/0.524
3w5uFADFerredoxin/0.520
4af6FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.513
1h42FADFerredoxin--NADP reductase1.18.1.20.512
4uajFADNa(+)-translocating NADH-quinone reductase subunit F/0.511
1bjkFADFerredoxin--NADP reductase1.18.1.20.509
4y9uFADNADPH--cytochrome P450 reductase/0.506
2rc6FADFerredoxin--NADP reductase/0.505
3zc3FADFerredoxin--NADP reductase1.18.1.20.504
1e64FADFerredoxin--NADP reductase1.18.1.20.503
1w35FADFerredoxin--NADP reductase1.18.1.20.497
4bprFADFerredoxin--NADP reductase1.18.1.20.495
4c43FADFerredoxin--NADP reductase1.18.1.20.493
1gjrFADFerredoxin--NADP reductase1.18.1.20.488
1qgyFADFerredoxin--NADP reductase1.18.1.20.488
3zbtFADFerredoxin--NADP reductase1.18.1.20.484
3qe2FADNADPH--cytochrome P450 reductase/0.483
3fpkFADFerredoxin-NADP reductase/0.482
4yafFADNADPH--cytochrome P450 reductase/0.479
1amoFADNADPH--cytochrome P450 reductase/0.478
1qh0FADFerredoxin--NADP reductase1.18.1.20.477
1ewyFADFerredoxin--NADP reductase1.18.1.20.472
1gvhFADFlavohemoprotein/0.472
1h85FADFerredoxin--NADP reductase1.18.1.20.471
1w87FADFerredoxin--NADP reductase1.18.1.20.470
3qfcFADNADPH--cytochrome P450 reductase/0.470
3qfsFADNADPH--cytochrome P450 reductase/0.470
2rc5FADFerredoxin--NADP reductase/0.469
1ogiFADFerredoxin--NADP reductase1.18.1.20.468
1go2FADFerredoxin--NADP reductase1.18.1.20.467
1queFADFerredoxin--NADP reductase1.18.1.20.467
3ojxFADNADPH--cytochrome P450 reductase/0.464
1e62FADFerredoxin--NADP reductase1.18.1.20.463
1fndFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.458
2ok8FADFerredoxin--NADP reductase, apicoplast/0.458
2r6hFADNa(+)-translocating NADH-quinone reductase subunit F/0.455
1ja1FADNADPH--cytochrome P450 reductase/0.452
4a322CDGlycylpeptide N-tetradecanoyltransferase/0.451
1j9zFADNADPH--cytochrome P450 reductase/0.449
1bx0FADFerredoxin--NADP reductase, chloroplastic1.18.1.20.447
1tllFADNitric oxide synthase, brain1.14.13.390.441
4y9rFADNADPH--cytochrome P450 reductase/0.441
4y7cFADNADPH--cytochrome P450 reductase/0.440