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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4a1oAMZBifunctional purine biosynthesis protein PurH2.1.2.3

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
4a1oAMZBifunctional purine biosynthesis protein PurH2.1.2.31.000
2b1i93ABifunctional purine biosynthesis protein PURH2.1.2.30.490
1oz0MS1Bifunctional purine biosynthesis protein PURH2.1.2.30.481
1m9nAMZBifunctional purine biosynthesis protein PURH2.1.2.30.467
1p4r354Bifunctional purine biosynthesis protein PURH2.1.2.30.459