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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3zu2NAIEnoyl-[acyl-carrier-protein] reductase [NADH]

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3zu2NAIEnoyl-[acyl-carrier-protein] reductase [NADH]/1.000
4bkqNAIEnoyl-[acyl-carrier-protein] reductase [NADH]/0.580
2nq8ZIDEnoyl-ACP reductase/0.522
1v35NAIEnoyl-ACP reductase/0.500
4eufNADTrans-2-enoyl-CoA reductase [NADH]/0.492
2wyvNADEnoyl-[acyl-carrier-protein] reductase [NADH]/0.491
4oxyNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.477
3uicNADEnoyl-[acyl-carrier-protein] reductase [NADH]/0.474
5cpbNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.470
4m87NADEnoyl-[acyl-carrier-protein] reductase [NADH]/0.464
4o1mNADEnoyl-acyl carrier reductase/0.459
1oc1ASVIsopenicillin N synthase1.21.3.10.456
1enpNADEnoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic1.3.1.90.450