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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3vqhIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.11

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3vqhIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.111.000
2jdtI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.652
2ojf4PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.609
2uzuL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.600
1q8tY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.589
1xh6R94cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.587
1ydtIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.587
2uzwSS4cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.585
2vo7M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.581
2f7e2EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.579
2oh02PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.574
3zo4QWIcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.573
2f7z6EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.563
2gu8796cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.563
2uzvSS5cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.560
1svhI08cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.559
2vo6M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.556
1sveI01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.554
1svgI04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.546
2jdsL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.543
2uw5GVNcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.543
2f7x4EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.541
3ow3SMYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.534
2c1aI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.529
1xhaR68cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.526
1ydrIQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.518
4axaRKDcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.515
1xh8R55cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.513
1xh5R68cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.511
2uw7GVPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.508
2vo3M04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.508
3e8cG96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.507
3e8eG98cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.504
1xh9R69cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.501
2gnhH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.500
2vo0M03cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.500
2c1bCQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.499
1xh7R96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.496
2uw0GVKcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.494
1xh4R69cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.493
3aglA03cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.485
1q8uH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.483
1rejB1LcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.483
1vebI05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.482
3bwjARXcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.478
2uztSS3cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.460
1bx6BA1cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.459
3zo1SIJcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.450
1q8wM77cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.443
2uvzGVJcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.442
3i5zZ48Mitogen-activated protein kinase 12.7.11.240.442
4gv10XZRAC-alpha serine/threonine-protein kinase2.7.11.10.442
3x2wATPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.441