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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3vo2FADFerredoxin--NADP reductase

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3vo2FADFerredoxin--NADP reductase/1.000
4af7FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.668
3mhpFADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.632
1gawFADFerredoxin/0.605
1gaqFADFerredoxin/0.601
4af6FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.596
1h42FADFerredoxin--NADP reductase1.18.1.20.589
1fnbFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.584
3zc3FADFerredoxin--NADP reductase1.18.1.20.584
1sm4FADFerredoxin--NADP reductase/0.580
1bx1FADFerredoxin--NADP reductase, chloroplastic1.18.1.20.578
2b5oFADFerredoxin--NADP reductase1.18.1.20.571
1queFADFerredoxin--NADP reductase1.18.1.20.570
1ogiFADFerredoxin--NADP reductase1.18.1.20.567
1gjrFADFerredoxin--NADP reductase1.18.1.20.562
1fncFDAFerredoxin--NADP reductase, chloroplastic1.18.1.20.557
2rc6FADFerredoxin--NADP reductase/0.552
4c43FADFerredoxin--NADP reductase1.18.1.20.549
1w35FADFerredoxin--NADP reductase1.18.1.20.540
4bprFADFerredoxin--NADP reductase1.18.1.20.539
3w5uFADFerredoxin/0.537
1bjkFADFerredoxin--NADP reductase1.18.1.20.526
3qe2FADNADPH--cytochrome P450 reductase/0.523
3qfcFADNADPH--cytochrome P450 reductase/0.523
1fndFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.516
1qgyFADFerredoxin--NADP reductase1.18.1.20.511
1amoFADNADPH--cytochrome P450 reductase/0.507
3zbtFADFerredoxin--NADP reductase1.18.1.20.506
1e62FADFerredoxin--NADP reductase1.18.1.20.505
1go2FADFerredoxin--NADP reductase1.18.1.20.505
1qh0FADFerredoxin--NADP reductase1.18.1.20.505
1e64FADFerredoxin--NADP reductase1.18.1.20.503
1h85FADFerredoxin--NADP reductase1.18.1.20.503
3fpkFADFerredoxin-NADP reductase/0.501
1e63FADFerredoxin--NADP reductase1.18.1.20.500
1ogjFADFerredoxin--NADP reductase1.18.1.20.499
1w87FADFerredoxin--NADP reductase1.18.1.20.499
1bx0FADFerredoxin--NADP reductase, chloroplastic1.18.1.20.493
4yaoFADNADPH--cytochrome P450 reductase/0.491
1gr1FADFerredoxin--NADP reductase1.18.1.20.488
4y9uFADNADPH--cytochrome P450 reductase/0.488
2ok8FADFerredoxin--NADP reductase, apicoplast/0.484
4y7cFADNADPH--cytochrome P450 reductase/0.480
3jqrFADFerredoxin--NADP reductase, apicoplast/0.476
4uajFADNa(+)-translocating NADH-quinone reductase subunit F/0.476
1ewyFADFerredoxin--NADP reductase1.18.1.20.474
3ojxFADNADPH--cytochrome P450 reductase/0.474
1qgzFADFerredoxin--NADP reductase1.18.1.20.473
1ja1FADNADPH--cytochrome P450 reductase/0.472
2rc5FADFerredoxin--NADP reductase/0.471
1j9zFADNADPH--cytochrome P450 reductase/0.464
2bpoFADNADPH--cytochrome P450 reductase/0.463
1tllFADNitric oxide synthase, brain1.14.13.390.462
4y9rFADNADPH--cytochrome P450 reductase/0.460
1xoqROFcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.459
4a322CDGlycylpeptide N-tetradecanoyltransferase/0.459
4yafFADNADPH--cytochrome P450 reductase/0.457
3qfsFADNADPH--cytochrome P450 reductase/0.453
4b12C23Glycylpeptide N-tetradecanoyltransferase/0.453
2xncFADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.450
3busSAHDemethylrebeccamycin-D-glucose O-methyltransferase/0.449
3g4iD71cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.449
1xonPILcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.448
3qftFADNADPH--cytochrome P450 reductase/0.447
4jlj1NMDeoxycytidine kinase2.7.1.740.444
2piaFMNPhthalate dioxygenase reductase/0.443
2r6hFADNa(+)-translocating NADH-quinone reductase subunit F/0.442
1b2rFADFerredoxin--NADP reductase1.18.1.20.440