sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 3ug8 | IMN | Aldo-keto reductase family 1 member C3 |
| PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
|---|---|---|---|---|---|
| 3ug8 | IMN | Aldo-keto reductase family 1 member C3 | / | 1.000 | |
| 3r8h | ZOM | Aldo-keto reductase family 1 member C3 | / | 0.629 | |
| 3ugr | IMN | Aldo-keto reductase family 1 member C3 | / | 0.626 | |
| 2f38 | 15M | Aldo-keto reductase family 1 member C3 | / | 0.619 | |
| 4dbu | BT9 | Aldo-keto reductase family 1 member C3 | / | 0.572 | |
| 1ry0 | PG2 | Aldo-keto reductase family 1 member C3 | / | 0.571 | |
| 1ry8 | RUT | Aldo-keto reductase family 1 member C3 | / | 0.557 | |
| 4hmn | 16J | Aldo-keto reductase family 1 member C3 | / | 0.556 | |
| 4dbw | 511 | Aldo-keto reductase family 1 member C3 | / | 0.542 | |
| 4h7c | 10H | Aldo-keto reductase family 1 member C3 | / | 0.537 | |
| 3r6i | JMS | Aldo-keto reductase family 1 member C3 | / | 0.536 | |
| 3uwe | VJJ | Aldo-keto reductase family 1 member C3 | / | 0.534 | |
| 4fam | 0SZ | Aldo-keto reductase family 1 member C3 | / | 0.533 | |
| 1s2c | FLF | Aldo-keto reductase family 1 member C3 | / | 0.529 | |
| 4fal | 0T0 | Aldo-keto reductase family 1 member C3 | / | 0.527 | |
| 1zq5 | E04 | Aldo-keto reductase family 1 member C3 | / | 0.523 | |
| 3r58 | NPS | Aldo-keto reductase family 1 member C3 | / | 0.521 | |
| 3r8g | IZP | Aldo-keto reductase family 1 member C3 | / | 0.516 | |
| 4fa3 | 0SL | Aldo-keto reductase family 1 member C3 | / | 0.513 | |
| 3r7m | SUZ | Aldo-keto reductase family 1 member C3 | / | 0.509 | |
| 3r94 | FLR | Aldo-keto reductase family 1 member C3 | / | 0.502 | |
| 3r43 | ID8 | Aldo-keto reductase family 1 member C3 | / | 0.497 | |
| 3ufy | NPX | Aldo-keto reductase family 1 member C3 | / | 0.494 | |
| 1xf0 | ASD | Aldo-keto reductase family 1 member C3 | / | 0.473 | |
| 4dbs | 0HV | Aldo-keto reductase family 1 member C3 | / | 0.468 | |
| 4b13 | X25 | Glycylpeptide N-tetradecanoyltransferase | / | 0.456 | |
| 4b12 | C23 | Glycylpeptide N-tetradecanoyltransferase | / | 0.454 | |
| 3qe2 | FMN | NADPH--cytochrome P450 reductase | / | 0.452 | |
| 3w5e | NVW | cAMP-specific 3',5'-cyclic phosphodiesterase 4B | 3.1.4.53 | 0.449 | |
| 1qiq | ACC | Isopenicillin N synthase | 1.21.3.1 | 0.447 | |
| 1i5r | HYC | Estradiol 17-beta-dehydrogenase 1 | 1.1.1.62 | 0.443 | |
| 1tco | FK5 | Peptidyl-prolyl cis-trans isomerase FKBP1A | 5.2.1.8 | 0.443 | |
| 1tco | FK5 | Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform | 3.1.3.16 | 0.443 | |
| 4gtr | 7TR | Protein farnesyltransferase subunit beta | 2.5.1.58 | 0.441 | |
| 4b11 | 7I1 | Glycylpeptide N-tetradecanoyltransferase | / | 0.440 |