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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3uelA1RPoly(ADP-ribose) glycohydrolase3.2.1.143

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3uelA1RPoly(ADP-ribose) glycohydrolase3.2.1.1431.000
4na4A1RPoly(ADP-ribose) glycohydrolase3.2.1.1430.618
4b1jA1RPoly(ADP-ribose) glycohydrolase3.2.1.1430.608
4b1hAR6Poly(ADP-ribose) glycohydrolase3.2.1.1430.598
4b1iA8PPoly(ADP-ribose) glycohydrolase3.2.1.1430.566
4epq0RRPoly(ADP-ribose) glycohydrolase/0.492
5cb5APRO-acetyl-ADP-ribose deacetylase/0.491
5cb3APRO-acetyl-ADP-ribose deacetylase/0.475
1i5rHYCEstradiol 17-beta-dehydrogenase 11.1.1.620.444