scPDB - Distribution of Binding site Similarity values of 3ta0 entry / Site 1

Distribution of Binding site similarity measured by Shaper

You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
3ta0	ATP	Nitrogen regulatory protein P-II (GlnB-3)

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
3ta0	ATP	Nitrogen regulatory protein P-II (GlnB-3)	/	1.000
2xzw	ATP	Nitrogen regulatory protein P-II	/	0.481
3ta1	ADP	Nitrogen regulatory protein P-II (GlnB-3)	/	0.458
3ncq	ATP	Nitrogen regulatory protein P-II (GlnB-2)	/	0.455
1v9o	ADP	Signaling protein	/	0.450
1v3s	ATP	Signaling protein	/	0.449
3ncr	ADP	Nitrogen regulatory protein P-II (GlnB-2)	/	0.445