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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3t423T4Aldose reductase1.1.1.21

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
3t423T4Aldose reductase1.1.1.211.000
2dv0ZSTAldose reductase1.1.1.210.675
1t41ID5Aldose reductase1.1.1.210.673
1z3n3NAAldose reductase1.1.1.210.671
3lenZSTAldose reductase1.1.1.210.665
1t40ID5Aldose reductase1.1.1.210.663
2fz9ZSTAldose reductase1.1.1.210.660
2ikj393Aldose reductase1.1.1.210.655
2pdh47DAldose reductase1.1.1.210.655
4gca2X9Aldose reductase1.1.1.210.655
2pdu393Aldose reductase1.1.1.210.654
2pdfZSTAldose reductase1.1.1.210.649
2duxZSTAldose reductase1.1.1.210.647
2hv5ZSTAldose reductase1.1.1.210.645
2hvoZSTAldose reductase1.1.1.210.642
3mb9ZSTAldose reductase1.1.1.210.642
1z8962PAldose reductase1.1.1.210.641
2pdmZSTAldose reductase1.1.1.210.640
2pdxZSTAldose reductase1.1.1.210.640
3m4h388Aldose reductase1.1.1.210.640
3ghsLDTAldose reductase1.1.1.210.634
2hvnZSTAldose reductase1.1.1.210.632
3m64393Aldose reductase1.1.1.210.632
2pd5ZSTAldose reductase1.1.1.210.630
3lboLDTAldose reductase1.1.1.210.628
2pdbZSTAldose reductase1.1.1.210.625
2pdp393Aldose reductase1.1.1.210.625
2pzn393Aldose reductase1.1.1.210.624
3g5eQ74Aldose reductase1.1.1.210.624
3lqlLDTAldose reductase1.1.1.210.623
4yu153NAldose reductase1.1.1.210.621
3ghrLDTAldose reductase1.1.1.210.616
3ghtLDTAldose reductase1.1.1.210.614
2fz8ZSTAldose reductase1.1.1.210.613
2pdg47DAldose reductase1.1.1.210.613
2qxwLDTAldose reductase1.1.1.210.609
3ld5LDTAldose reductase1.1.1.210.609
1frbZSTAldose reductase-related protein 2/0.608
2duzZSTAldose reductase1.1.1.210.608
3ghuLDTAldose reductase1.1.1.210.608
3m0iZSTAldose reductase1.1.1.210.607
2pdiZSTAldose reductase1.1.1.210.606
3lz5LDTAldose reductase1.1.1.210.605
2i16LDTAldose reductase1.1.1.210.603
2i17LDTAldose reductase1.1.1.210.602
1us0LDTAldose reductase1.1.1.210.600
1pwlBFIAldose reductase1.1.1.210.599
2ikhLITAldose reductase1.1.1.210.597
2pdq47DAldose reductase1.1.1.210.591
2pdn47DAldose reductase1.1.1.210.585
2iki388Aldose reductase1.1.1.210.582
3mc5393Aldose reductase1.1.1.210.574
2pdc393Aldose reductase1.1.1.210.564
1ieiZESAldose reductase1.1.1.210.556
2pdlTOLAldose reductase1.1.1.210.551
1zuaTOLAldo-keto reductase family 1 member B101.1.10.547
2fzdTOLAldose reductase1.1.1.210.542
1ah3TOLAldose reductase1.1.1.210.540
2pdj393Aldose reductase1.1.1.210.529
4jsr1NQNAD-dependent protein deacetylase sirtuin-3, mitochondrial3.5.10.516
3ny8JRZBeta-2 adrenergic receptor/0.502
2xupTZ5Acetylcholinesterase3.1.1.70.500
3n0hTOPDihydrofolate reductase1.5.1.30.497
4b13X25Glycylpeptide N-tetradecanoyltransferase/0.492
3g493G4Corticosteroid 11-beta-dehydrogenase isozyme 11.1.1.1460.489
1ihiIU5Aldo-keto reductase family 1 member C2/0.484
2cbqTH2Neocarzinostatin/0.483
4b117I1Glycylpeptide N-tetradecanoyltransferase/0.483
3ghvGHCDihydrofolate reductase1.5.1.30.482
3k4s0MOcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.481
3p2vDOYAldose reductase1.1.1.210.481
1el3I84Aldose reductase1.1.1.210.480
3gsiTHGDimethylglycine oxidase1.5.3.100.480
4eilFOLBifunctional dihydrofolate reductase-thymidylate synthase1.5.1.30.480
4li81XQTankyrase-12.4.2.300.480
2y60M8FIsopenicillin N synthase1.21.3.10.479
2yneYNEGlycylpeptide N-tetradecanoyltransferase/0.478
4b12C23Glycylpeptide N-tetradecanoyltransferase/0.478
3w5eNVWcAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.476
1xf0ASDAldo-keto reductase family 1 member C3/0.474
2aovC2MHistamine N-methyltransferase2.1.1.80.474
2xuoTZ4Acetylcholinesterase3.1.1.70.474
4li61XOTankyrase-12.4.2.300.474
1dgbNDPCatalase1.11.1.60.473
2fm5M99cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.472
3wd9QPCcAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.472
1p91SAM23S rRNA (guanine(745)-N(1))-methyltransferase/0.471
2bjsACVIsopenicillin N synthase1.21.3.10.471
2hzqSTRApolipoprotein D/0.471
1i5rHYCEstradiol 17-beta-dehydrogenase 11.1.1.620.470
1lnmDTXBilin-binding protein/0.470
4at4T6EBDNF/NT-3 growth factors receptor2.7.10.10.469
4bvnP32Beta-1 adrenergic receptor/0.469
4jtqFLPAldo-keto reductase family 1 member C2/0.469
4li71XPTankyrase-12.4.2.300.469
2aot2PMHistamine N-methyltransferase2.1.1.80.468
4kq6DLZ6,7-dimethyl-8-ribityllumazine synthase/0.468
1nqvLMZ6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.467
3zkyWT4Isopenicillin N synthase1.21.3.10.467
4ky404JBifunctional dihydrofolate reductase-thymidylate synthase1.5.1.30.467
5jqhCAUBeta-2 adrenergic receptor/0.467
1tfz8694-hydroxyphenylpyruvate dioxygenase1.13.11.270.466
3pblETQD(3) dopamine receptor/0.466
1xoqROFcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.465
1zq5E04Aldo-keto reductase family 1 member C3/0.465
3g4kROLcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.465
2gvcFADThiol-specific monooxygenase1.14.130.464
1h35R01Squalene--hopene cyclase4.2.1.1290.463
1rkwPNTHTH-type transcriptional regulator QacR/0.463
1uhoVDNcGMP-specific 3',5'-cyclic phosphodiesterase/0.463
1zgcA2EAcetylcholinesterase3.1.1.70.463
2aclL05Oxysterols receptor LXR-alpha/0.463
2xuhTZ4Acetylcholinesterase3.1.1.70.463
3f3y4OABile salt sulfotransferase2.8.2.140.463
3jsxCC2NAD(P)H dehydrogenase [quinone] 11.6.5.20.463
4dbw511Aldo-keto reductase family 1 member C3/0.463
1eveE20Acetylcholinesterase3.1.1.70.462
4bbhYBNGlycylpeptide N-tetradecanoyltransferase/0.462
4hyf1AKTankyrase-22.4.2.300.462
4msk2C8Tankyrase-12.4.2.300.462
1ut6A8NAcetylcholinesterase3.1.1.70.461
1zgbA1EAcetylcholinesterase3.1.1.70.461
2pdkSBIAldose reductase1.1.1.210.461
2xuiTZ5Acetylcholinesterase3.1.1.70.461
4jpg1OXPyruvate kinase PKM2.7.1.400.461
5d6lCAUBeta-2 adrenergic receptor/0.461
1xonPILcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.460
2a59LMZ6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.460
2agtFIDAldose reductase1.1.1.210.460
2f3815MAldo-keto reductase family 1 member C3/0.460
3vf60H6Glucokinase2.7.1.20.460
3wavDWVEctonucleotide pyrophosphatase/phosphodiesterase family member 23.1.4.390.460
4bj9UHBTankyrase-22.4.2.300.460
1uk0FRMPoly [ADP-ribose] polymerase 12.4.2.300.459
2cekN8TAcetylcholinesterase3.1.1.70.459
2iqdLPAAldose reductase1.1.1.210.459
4dk70KSOxysterols receptor LXR-beta/0.459
4psbGA3Cytokinin-specific binding protein/0.459
5fd8A5APutative carboxypeptidase yocD/0.459
1oynROLcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.458
1q9mROLcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.458
2a57CRM6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.458
4gvsF4MMethenyltetrahydromethanopterin cyclohydrolase3.5.4.270.458
4mm729JNa(+):neurotransmitter symporter (Snf family)/0.458
1dghNDPCatalase1.11.1.60.457
1ry0PG2Aldo-keto reductase family 1 member C3/0.457
1tbbROLcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.457
2wu4HBPAcetylcholinesterase3.1.1.70.457
2xugTZ4Acetylcholinesterase3.1.1.70.457
2xujTZ5Acetylcholinesterase3.1.1.70.457
4a959MTGlycylpeptide N-tetradecanoyltransferase/0.457
4myq19TcAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.457
2f2kTGGAldose reductase1.1.1.210.456
3ch6311Corticosteroid 11-beta-dehydrogenase isozyme 11.1.1.1460.456
3hxbBD5Geranylgeranyl transferase type-2 subunit beta2.5.1.600.456
3hxeBD8Geranylgeranyl transferase type-2 subunit beta2.5.1.600.456
3t31DCQSulfide-quinone reductase/0.456
4kn104JFolate receptor beta/0.456
4mt92D6Tankyrase-12.4.2.300.456
4u163C0Muscarinic acetylcholine receptor M3/0.456
1pj7FFODimethylglycine oxidase1.5.3.100.455
2fzbTOLAldose reductase1.1.1.210.455
4fam0SZAldo-keto reductase family 1 member C3/0.455
1mkdZARcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.454
4a322CDGlycylpeptide N-tetradecanoyltransferase/0.454
4kn2LYAFolate receptor beta/0.454
3o57ZG2cAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.453
3rj0BLDProtein BRASSINOSTEROID INSENSITIVE 12.7.10.10.453
3vo2FADFerredoxin--NADP reductase/0.453
2v2zCDM4-diphosphocytidyl-2-C-methyl-D-erythritol kinase/0.452
2w6cBM4Acetylcholinesterase3.1.1.70.452
2xufTZ4Acetylcholinesterase3.1.1.70.452
2xuqTZ4Acetylcholinesterase3.1.1.70.452
3g45988cAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.452
3g4gD71cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.452
3g58988cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.452
4b144XBGlycylpeptide N-tetradecanoyltransferase/0.452
4c2z646Glycylpeptide N-tetradecanoyltransferase 1/0.452
2ycxP32Beta-1 adrenergic receptor/0.452
5a8eXTKBeta-1 adrenergic receptor/0.452
1kyvRBF6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.451
1u65CP0Acetylcholinesterase3.1.1.70.451
1xorZARcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.451
2aouCQAHistamine N-methyltransferase2.1.1.80.451
2c1zKMPAnthocyanidin 3-O-glucosyltransferase 22.4.1.1150.451
2vt4P32Beta-1 adrenergic receptor/0.451
3hmvHBTcAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.451
4phlPILPhosphodiesterase/0.451
1zknIBMcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.450
2iyaZIOOleandomycin glycosyltransferase/0.450
2ouu35GcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.450
2psjCEIRenilla-luciferin 2-monooxygenase1.13.12.50.450
3g4lROFcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.450
4hlm16STankyrase-22.4.2.300.450
4lsaBLDProtein BRASSINOSTEROID INSENSITIVE 12.7.10.10.450
3g4iD71cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.449
3nhpHGZRibosyldihydronicotinamide dehydrogenase [quinone]/0.449
3sfh1DIHistone deacetylase 83.5.1.980.449
3sl6JN8cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.449
4b65NDPL-ornithine N(5)-monooxygenase/0.449
4bjbP34Tankyrase-22.4.2.300.449
4e0u0MVCyclic dipeptide N-prenyltransferase/0.449
4e2yJHZMethyltransferase/0.449
4h7c10HAldo-keto reductase family 1 member C3/0.449
4jt81NRNAD-dependent protein deacetylase sirtuin-3, mitochondrial3.5.10.449
4kmzFOLFolate receptor beta/0.449
1m9hNAD2,5-diketo-D-gluconic acid reductase A1.1.1.3460.448
1s2cFLFAldo-keto reductase family 1 member C3/0.448
2j3qTFLAcetylcholinesterase3.1.1.70.448
4a312CBGlycylpeptide N-tetradecanoyltransferase/0.448
4e907RGHigh affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A/0.448
4gtr7TRProtein farnesyltransferase subunit beta2.5.1.580.448
4hcy0YNTransketolase/0.448
1hqtNAPAlcohol dehydrogenase [NADP(+)]1.1.1.20.447
2oazI96Methionine aminopeptidase 2/0.447
3a1l2CCCytochrome P450/0.447
3zecANPAdenosine monophosphate-protein transferase SoFic2.7.7.n10.447
4arbC57Acetylcholinesterase3.1.1.70.447
4flkY10Methionine aminopeptidase 1/0.447
4ga8SBIAldo-keto reductase family 1 member B101.1.10.447
4j7hTRHPCZA361.3/0.447
4n1fCZHObelin/0.447
4nqgCZHMitrocomin/0.447
1bk0ACVIsopenicillin N synthase1.21.3.10.446
1kyxCRM6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.446
1s9dAFBCytohesin-2/0.446
1s9dAFBADP-ribosylation factor 1/0.446
1x8lOXRRetinol dehydratase/0.446
1y2k7DEcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.446
3mauEXTPutative sphingosine-1-phosphate lyase/0.446
3sl8JN7cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.446
4jt91NSNAD-dependent protein deacetylase sirtuin-3, mitochondrial3.5.10.446
4mvh2F5cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.446
4zzi1NSNAD-dependent protein deacetylase sirtuin-13.5.10.446
2ycyP32Beta-1 adrenergic receptor/0.446
5d5aCAUBeta-2 adrenergic receptor/0.446
3uonQNBMuscarinic acetylcholine receptor M2/0.446
1hb3SCVIsopenicillin N synthase1.21.3.10.445
1isgAGSADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 23.2.2.60.445
1kmsLIHDihydrofolate reductase1.5.1.30.445
1w6jR71Lanosterol synthase5.4.99.70.445
1y2d4DEcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.445
2jf6S55Strictosidine-O-beta-D-glucosidase3.2.1.1050.445
2ouyCMPcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.445
3dr7GPDGDP-perosamine synthase/0.445
4bfyZVYPantothenate kinase2.7.1.330.445
4dbuBT9Aldo-keto reductase family 1 member C3/0.445
4f1l0RYPoly [ADP-ribose] polymerase 142.4.2.300.445
4hmn16JAldo-keto reductase family 1 member C3/0.445
2b01TUDPhospholipase A2, major isoenzyme3.1.1.40.444
2zitNADExotoxin A2.4.2.360.444
3q9bB3NAcetylpolyamine amidohydrolase/0.444
3x04GNPPhosphatidylinositol 5-phosphate 4-kinase type-2 beta2.7.1.1490.444
4araC56Acetylcholinesterase3.1.1.70.444
4bb6HD1Corticosteroid 11-beta-dehydrogenase isozyme 11.1.1.1460.444
4jqaID8Aldo-keto reductase family 1 member C2/0.444
1udtVIAcGMP-specific 3',5'-cyclic phosphodiesterase/0.443
1ygjRMCPyridoxal kinase2.7.1.350.443
2ha6SCKAcetylcholinesterase3.1.1.70.443
2inzOHPAldose reductase1.1.1.210.443
3r43ID8Aldo-keto reductase family 1 member C3/0.443
3x025GPPhosphatidylinositol 5-phosphate 4-kinase type-2 beta2.7.1.1490.443
4jq1NPSAldo-keto reductase family 1 member C2/0.443
5liu388Aldo-keto reductase family 1 member B101.1.10.443
1esmCOAPantothenate kinase2.7.1.330.442
1t47NTD4-hydroxyphenylpyruvate dioxygenase1.13.11.270.442
2tplHPPTyrosine phenol-lyase4.1.99.20.442
3ghwGHWDihydrofolate reductase1.5.1.30.442
3u2cSUZAldose reductase1.1.1.210.442
4f0rMTA5-methylthioadenosine/S-adenosylhomocysteine deaminase/0.442
4x3uSVRChromobox protein homolog 7/0.442
1ry8RUTAldo-keto reductase family 1 member C3/0.441
1y60H4M5,6,7,8-tetrahydromethanopterin hydro-lyase4.2.1.1470.441
2weyEV1cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.441
2y0jAXCcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.441
4gtv7TRGeranylgeranyl transferase type-2 subunit beta2.5.1.600.441
4ia05BBcGMP-specific 3',5'-cyclic phosphodiesterase/0.441
4wevSUZAldo-keto reductase family 1 member B101.1.10.441
4gbrCAUBeta-2 adrenergic receptor/0.441
1g60SAMModification methylase MboII2.1.1.720.440
1o6qR17Squalene--hopene cyclase4.2.1.1290.440
1odcA8BAcetylcholinesterase3.1.1.70.440
1ohkCOPDihydrofolate reductase1.5.1.30.440
1pqc444Oxysterols receptor LXR-beta/0.440
1rvvINI6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.440
2bfaCB3Pteridine reductase 11.5.1.330.440
2fm0M98cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.440
2g5w8PG12-oxophytodienoate reductase 31.3.1.420.440
3dylIBMHigh affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A/0.440
3lz6A0DCorticosteroid 11-beta-dehydrogenase isozyme 11.1.1.1460.440
3wqmB29Diterpene synthase3.1.7.80.440
4a30QMIGlycylpeptide N-tetradecanoyltransferase/0.440
4a86H35Major pollen allergen Bet v 1-A/0.440
4dbs0HVAldo-keto reductase family 1 member C3/0.440
4ey7E20Acetylcholinesterase3.1.1.70.440
4hf415HcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.440
4jq3ZOMAldo-keto reductase family 1 member C2/0.440