sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 3sm2 | 478 | Putative gag-pro-pol polyprotein |
| PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
|---|---|---|---|---|---|
| 3sm2 | 478 | Putative gag-pro-pol polyprotein | / | 1.000 | |
| 3slz | 3TL | Putative gag-pro-pol polyprotein | / | 0.741 | |
| 3kdd | JZQ | Gag-Pol polyprotein | 3.4.23.16 | 0.571 | |
| 3ekp | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.558 | |
| 3lin | E13 | Protease | / | 0.548 | |
| 4a6b | QG8 | Gag-Pol polyprotein | 3.4.23.16 | 0.541 | |
| 4a6c | QG9 | Gag-Pol polyprotein | 3.4.23.16 | 0.538 | |
| 3s43 | 478 | Protease | / | 0.536 | |
| 3nu3 | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.535 | |
| 3dk1 | G05 | Gag-Pol polyprotein | 3.4.23.16 | 0.532 | |
| 4ye3 | G04 | Gag-Pol polyprotein | 3.4.23.16 | 0.532 | |
| 3kdc | JZP | Gag-Pol polyprotein | 3.4.23.16 | 0.531 | |
| 2ieo | 017 | Protease | / | 0.529 | |
| 3bgc | LJH | Gag-Pol polyprotein | 3.4.23.16 | 0.529 | |
| 2qd8 | 065 | Gag-Pol polyprotein | 3.4.23.16 | 0.527 | |
| 3bgb | LJG | Gag-Pol polyprotein | 3.4.23.16 | 0.527 | |
| 4njv | RIT | Protease | / | 0.527 | |
| 1sdv | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.526 | |
| 1msm | JE2 | Gag-Pol polyprotein | 3.4.23.16 | 0.525 | |
| 3a2o | KNJ | Gag-Pol polyprotein | 3.4.23.16 | 0.525 | |
| 3ekw | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.525 | |
| 3t3c | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.523 | |
| 2f80 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.522 | |
| 3kf0 | 3TL | Gag-Pol polyprotein | / | 0.522 | |
| 3liq | E14 | Protease | / | 0.521 | |
| 3liv | E16 | Protease | / | 0.521 | |
| 4heg | G52 | Gag-Pol polyprotein | 3.4.23.16 | 0.521 | |
| 3lzu | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.520 | |
| 3oxv | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.519 | |
| 3vfa | 031 | Gag-Pol polyprotein | 3.4.23.16 | 0.519 | |
| 1c6y | MK1 | Protease | / | 0.518 | |
| 2wkz | 5AH | Gag-Pol polyprotein | / | 0.518 | |
| 1idb | 0DO | Gag-Pol polyprotein | / | 0.517 | |
| 4njs | G08 | Protease | / | 0.517 | |
| 1a9m | U0E | Gag-Pol polyprotein | / | 0.516 | |
| 2qd6 | 065 | Gag-Pol polyprotein | 3.4.23.16 | 0.516 | |
| 3fx5 | KNI | Gag-Pol polyprotein | 3.4.23.16 | 0.516 | |
| 2bqv | A1A | Protease | / | 0.515 | |
| 3cyw | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.515 | |
| 3nu5 | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.515 | |
| 1ec2 | BEJ | Gag-Pol polyprotein | 3.4.23.16 | 0.514 | |
| 1fg6 | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.514 | |
| 3d1z | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.514 | |
| 4hdb | G52 | Gag-Pol polyprotein | 3.4.23.16 | 0.514 | |
| 1ec3 | MS3 | Gag-Pol polyprotein | 3.4.23.16 | 0.513 | |
| 1hpx | KNI | Gag-Pol polyprotein | / | 0.513 | |
| 2bb9 | AKC | Gag-Pol polyprotein | 3.4.23.16 | 0.512 | |
| 2bpw | 1IN | Gag-Pol polyprotein | 3.4.23.16 | 0.512 | |
| 3kfn | 3TL | Gag-Pol polyprotein | / | 0.512 | |
| 1d4k | PI8 | Gag-Pol polyprotein | 3.4.23.16 | 0.511 | |
| 1hsh | MK1 | Gag-Pol polyprotein | / | 0.510 | |
| 2wl0 | 5AH | Gag-Pol polyprotein | / | 0.510 | |
| 3ttp | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.510 | |
| 4dfg | 0JV | Gag-Pol polyprotein | 3.4.23.16 | 0.510 | |
| 2fdd | 385 | Pol protein | / | 0.509 | |
| 3nls | 016 | Gag-Pol polyprotein | 3.4.23.16 | 0.509 | |
| 3s85 | LK0 | Gag-Pol polyprotein | / | 0.509 | |
| 4hla | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.509 | |
| 1t7i | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.508 | |
| 2a4f | AAU | V-1 protease | / | 0.508 | |
| 3lit | E15 | Protease | / | 0.508 | |
| 1bwa | XV6 | Gag-Pol polyprotein | 3.4.23.16 | 0.507 | |
| 1d4i | BEG | Gag-Pol polyprotein | 3.4.23.16 | 0.507 | |
| 3el1 | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.507 | |
| 3el9 | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.507 | |
| 3kfr | 3TL | Gag-Pol polyprotein | / | 0.507 | |
| 3st5 | G89 | Gag-Pol polyprotein | 3.4.23.16 | 0.507 | |
| 1wbm | BLL | Pol protein | / | 0.506 | |
| 2i4d | QFI | Protease | / | 0.506 | |
| 3nu4 | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.506 | |
| 1sbg | IM1 | Gag-Pol polyprotein | / | 0.505 | |
| 2cem | 2AH | Pol protein | / | 0.505 | |
| 2fde | 385 | Gag-Pol polyprotein | 3.4.23.16 | 0.505 | |
| 1hxw | RIT | Gag-Pol polyprotein | / | 0.504 | |
| 3i2l | 2NC | Protease | / | 0.504 | |
| 3s54 | 017 | Protease | / | 0.504 | |
| 1d4h | BEH | Gag-Pol polyprotein | 3.4.23.16 | 0.503 | |
| 3i6o | GR6 | Gag-Pol polyprotein | 3.4.23.16 | 0.503 | |
| 1mrw | K57 | Gag-Pol polyprotein | 3.4.23.16 | 0.502 | |
| 1sdt | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.502 | |
| 2r5p | MK1 | Gag-Pol polyprotein | / | 0.502 | |
| 3mws | 017 | Pol protein | / | 0.502 | |
| 1sgu | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.501 | |
| 1wbk | 568 | Pol protein | / | 0.501 | |
| 2pym | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.501 | |
| 4j55 | 031 | Gag-Pol polyprotein | 3.4.23.16 | 0.501 | |
| 1ebk | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.500 | |
| 2f8g | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.500 | |
| 2hc0 | AB2 | Protease | / | 0.500 | |
| 2nnk | ROC | Protease | / | 0.500 | |
| 3sa7 | 55A | Protease | / | 0.500 | |
| 1ec0 | BED | Gag-Pol polyprotein | 3.4.23.16 | 0.499 | |
| 3ucb | 017 | Gag-Pol polyprotein | / | 0.499 | |
| 3vf5 | 031 | Gag-Pol polyprotein | 3.4.23.16 | 0.499 | |
| 2cen | 4AH | Protease | / | 0.498 | |
| 2i4v | DJR | V-1 protease | / | 0.498 | |
| 3em4 | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.498 | |
| 3ggu | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.498 | |
| 4qgi | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.498 | |
| 1npv | L27 | Gag-Pol polyprotein | 3.4.23.16 | 0.497 | |
| 2aqu | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.497 | |
| 2avm | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.497 | |
| 2qci | 065 | Gag-Pol polyprotein | 3.4.23.16 | 0.497 | |
| 2z54 | AB1 | Gag-Pol polyprotein | 3.4.23.16 | 0.497 | |
| 3cyx | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.497 | |
| 4j5j | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.497 | |
| 4q1y | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.497 | |
| 1k6v | XN2 | Gag-Pol polyprotein | 3.4.23.16 | 0.496 | |
| 1xl5 | 190 | Gag-Pol polyprotein | 3.4.23.16 | 0.496 | |
| 2pk6 | O33 | V-1 protease | / | 0.496 | |
| 2xye | CXG | Gag-Pol polyprotein | / | 0.496 | |
| 3djk | G55 | Gag-Pol polyprotein | 3.4.23.16 | 0.496 | |
| 1fej | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.495 | |
| 1npa | 3NH | Gag-Pol polyprotein | 3.4.23.16 | 0.495 | |
| 1npw | LGZ | Gag-Pol polyprotein | 3.4.23.16 | 0.495 | |
| 1t7k | BH0 | Gag-Pol polyprotein | 3.4.23.16 | 0.495 | |
| 1vik | BAY | Gag-Pol polyprotein | / | 0.495 | |
| 1w5v | BE3 | Gag-Pol polyprotein | 3.4.23.16 | 0.495 | |
| 2qi3 | MZ5 | Gag-Pol polyprotein | / | 0.495 | |
| 2uxz | HI1 | Gag-Pol polyprotein | 3.4.23.16 | 0.495 | |
| 3qn8 | NI7 | Gag-Pol polyprotein | 3.4.23.16 | 0.495 | |
| 1d4j | MSC | Gag-Pol polyprotein | 3.4.23.16 | 0.494 | |
| 1yt9 | OIS | Gag-Pol polyprotein | / | 0.494 | |
| 2bpv | 1IN | Gag-Pol polyprotein | 3.4.23.16 | 0.494 | |
| 2fxe | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.494 | |
| 2qhc | AB1 | Protease | / | 0.494 | |
| 3nu6 | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.494 | |
| 3nu9 | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.494 | |
| 3oxx | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.494 | |
| 3zpt | M8Y | Gag-Pol polyprotein | 3.4.23.16 | 0.494 | |
| 4q1w | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.494 | |
| 1ffi | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.493 | |
| 2hb3 | GRL | Protease | / | 0.493 | |
| 2nmy | ROC | Protease | / | 0.493 | |
| 3nuo | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.493 | |
| 4hdf | G52 | Gag-Pol polyprotein | 3.4.23.16 | 0.493 | |
| 1bdr | IM1 | Gag-Pol polyprotein | 3.4.23.16 | 0.492 | |
| 1msn | JE2 | Gag-Pol polyprotein | 3.4.23.16 | 0.492 | |
| 2z4o | 065 | Gag-Pol polyprotein | 3.4.23.16 | 0.492 | |
| 3qaa | G04 | Gag-Pol polyprotein | 3.4.23.16 | 0.492 | |
| 1eby | BEB | Gag-Pol polyprotein | 3.4.23.16 | 0.491 | |
| 1hiv | 1ZK | Gag-Pol polyprotein | / | 0.491 | |
| 1hvr | XK2 | Gag-Pol polyprotein | / | 0.491 | |
| 1izh | Q50 | Protease | / | 0.491 | |
| 2rkf | AB1 | Pol protein | / | 0.491 | |
| 1fgc | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.490 | |
| 2qi5 | MZ7 | Gag-Pol polyprotein | / | 0.490 | |
| 3gga | GGW | Gag-Pol polyprotein | / | 0.490 | |
| 3kfs | 3TL | Gag-Pol polyprotein | / | 0.490 | |
| 3oxw | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.490 | |
| 4djo | MK5 | Pol polyprotein | / | 0.490 | |
| 1w5y | BE6 | Gag-Pol polyprotein | 3.4.23.16 | 0.489 | |
| 2b7z | MK1 | Gag-Pol polyprotein | / | 0.489 | |
| 3tl9 | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.489 | |
| 1odw | 0E8 | Gag-Pol polyprotein | 3.4.23.16 | 0.488 | |
| 1zsr | 0ZT | Gag-Pol polyprotein | 3.4.23.16 | 0.488 | |
| 2b60 | RIT | Pol polyprotein | / | 0.488 | |
| 2q5k | AB1 | Protease | / | 0.488 | |
| 2qnn | QN1 | Gag-Pol polyprotein | 3.4.23.16 | 0.488 | |
| 3dcr | KVS | Protease | / | 0.488 | |
| 3ec0 | GRL | Gag-Pol polyprotein | 3.4.23.47 | 0.488 | |
| 3ekq | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.488 | |
| 3jw2 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.488 | |
| 3ndu | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.488 | |
| 3qp0 | NI8 | Gag-Pol polyprotein | 3.4.23.16 | 0.488 | |
| 1bai | 0Q4 | Gag-Pro polyprotein | / | 0.487 | |
| 1ebz | BEC | Gag-Pol polyprotein | 3.4.23.16 | 0.487 | |
| 1hsg | MK1 | Gag-Pol polyprotein | / | 0.487 | |
| 3ekt | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.487 | |
| 3sa5 | A69 | Protease | / | 0.487 | |
| 4djr | 0KJ | Pol polyprotein | / | 0.487 | |
| 1hvi | A77 | Protease | / | 0.486 | |
| 1t7j | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.486 | |
| 2p3c | 3TL | Protease | / | 0.486 | |
| 2qak | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.486 | |
| 3eky | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.486 | |
| 3lix | E17 | Protease | / | 0.486 | |
| 3ndx | RIT | Gag-Pol polyprotein | 3.4.23.16 | 0.486 | |
| 3pwr | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.486 | |
| 4a4q | UX9 | Pol protein | / | 0.486 | |
| 2xyf | G40 | Gag-Pol polyprotein | / | 0.485 | |
| 3ogq | AB1 | Pol polyprotein | / | 0.485 | |
| 3vfb | 031 | Gag-Pol polyprotein | 3.4.23.16 | 0.485 | |
| 1ec1 | BEE | Gag-Pol polyprotein | 3.4.23.16 | 0.484 | |
| 1hos | PHP | Gag-Pol polyprotein | / | 0.484 | |
| 1mtr | PI6 | Gag-Pol polyprotein | 3.4.23.16 | 0.484 | |
| 1mui | AB1 | Protease | / | 0.484 | |
| 2cej | 1AH | Pol protein | / | 0.484 | |
| 2uy0 | HV1 | Gag-Pol polyprotein | 3.4.23.16 | 0.484 | |
| 3el5 | 1UN | Gag-Pol polyprotein | / | 0.484 | |
| 3ggx | GGX | Gag-Pol polyprotein | / | 0.484 | |
| 3jvw | DMP | Gag-Pol polyprotein | 3.4.23.16 | 0.484 | |
| 3own | 3OW | Renin | 3.4.23.15 | 0.484 | |
| 4q1x | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.484 | |
| 1bv7 | XV6 | Gag-Pol polyprotein | 3.4.23.16 | 0.483 | |
| 1daz | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.483 | |
| 2aoe | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.483 | |
| 2avs | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.483 | |
| 2i4w | KGQ | Protease | / | 0.483 | |
| 2pk5 | 075 | Protease | / | 0.483 | |
| 4nju | TPV | Protease | / | 0.483 | |
| 1a8g | 2Z4 | Gag-Pol polyprotein | 3.4.23.16 | 0.482 | |
| 1n49 | RIT | Gag-Pol polyprotein | 3.4.23.16 | 0.482 | |
| 1tcx | IM1 | Gag-Pol polyprotein | 3.4.23.16 | 0.482 | |
| 2i4u | DJR | Protease | / | 0.482 | |
| 2q54 | MU1 | Protease | / | 0.482 | |
| 2qd7 | 065 | Gag-Pol polyprotein | 3.4.23.16 | 0.482 | |
| 2qhz | MZ2 | Gag-Pol polyprotein | / | 0.482 | |
| 2r5q | 1UN | Gag-Pol polyprotein | / | 0.482 | |
| 3nuj | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.482 | |
| 3o9h | K2E | Gag-Pol polyprotein | / | 0.482 | |
| 3oy4 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.482 | |
| 3zpu | M8B | Gag-Pol polyprotein | 3.4.23.16 | 0.482 | |
| 4rvj | 478 | Protease | / | 0.482 | |
| 2avv | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.481 | |
| 2bpz | 3IN | Gag-Pol polyprotein | 3.4.23.16 | 0.481 | |
| 3qrm | NK7 | Gag-Pol polyprotein | 3.4.23.16 | 0.481 | |
| 3sa9 | A68 | Protease | / | 0.481 | |
| 4dqc | 017 | Gag-Pol polyprotein | / | 0.481 | |
| 1sdu | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.480 | |
| 2fxd | DR7 | Pol polyprotein | / | 0.480 | |
| 2hs1 | 017 | Protease | / | 0.480 | |
| 3d1y | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.480 | |
| 3o99 | K13 | Pol polyprotein | / | 0.480 | |
| 3uhl | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.480 | |
| 4kb9 | G79 | Protease | / | 0.480 | |
| 1d4l | PI9 | Gag-Pol polyprotein | 3.4.23.16 | 0.479 | |
| 1iiq | 0ZR | Gag-Pol polyprotein | 3.4.23.16 | 0.479 | |
| 1ody | LP1 | Gag-Pol polyprotein | 3.4.23.16 | 0.479 | |
| 1vij | BAY | Gag-Pol polyprotein | / | 0.479 | |
| 2f3k | RO1 | Protease | / | 0.479 | |
| 3bvb | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.479 | |
| 3zps | EQM | Gag-Pol polyprotein | 3.4.23.16 | 0.479 | |
| 4dqf | 017 | Gag-Pol polyprotein | / | 0.479 | |
| 1dif | A85 | Gag-Pol polyprotein | / | 0.478 | |
| 1mes | DMP | Gag-Pol polyprotein | 3.4.23.16 | 0.478 | |
| 2qnq | QN3 | Gag-Pol polyprotein | 3.4.23.16 | 0.478 | |
| 3o9d | K19 | Pol polyprotein | / | 0.478 | |
| 3sa3 | 23X | Protease | / | 0.478 | |
| 4dqh | 017 | Gag-Pol polyprotein | / | 0.478 | |
| 1d4y | TPV | Gag-Pol polyprotein | 3.4.23.16 | 0.477 | |
| 1g35 | AHF | Gag-Pol polyprotein | 3.4.23.16 | 0.477 | |
| 1ida | 0PO | Gag-Pol polyprotein | 3.4.23.47 | 0.477 | |
| 2i4x | KGQ | Protease | / | 0.477 | |
| 2p3b | 3TL | V-1 PROTEASE protein | / | 0.477 | |
| 2p3b | 3TL | V-1 protease | / | 0.477 | |
| 2q63 | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.477 | |
| 3aid | ARQ | Gag-Pol polyprotein | 3.4.23.16 | 0.477 | |
| 3o9g | F53 | Gag-Pol polyprotein | / | 0.477 | |
| 1c6z | ROC | Protease | / | 0.476 | |
| 1jld | 0PP | Gag-Pol polyprotein | / | 0.476 | |
| 1pro | A88 | Gag-Pol polyprotein | / | 0.476 | |
| 1qbs | DMP | Gag-Pol polyprotein | 3.4.23.16 | 0.476 | |
| 2pyn | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.476 | |
| 3d1x | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.476 | |
| 3i7e | DJR | Gag-Pol polyprotein | / | 0.476 | |
| 3nyg | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.476 | |
| 3saa | 77F | Protease | / | 0.476 | |
| 4hdp | G52 | Gag-Pol polyprotein | 3.4.23.16 | 0.476 | |
| 2qhy | MZ1 | Gag-Pol polyprotein | / | 0.475 | |
| 3jvy | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.475 | |
| 3lzv | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.475 | |
| 3so9 | 017 | Pol protein | / | 0.475 | |
| 4djp | M73 | Pol polyprotein | / | 0.475 | |
| 4djq | M86 | Pol polyprotein | / | 0.475 | |
| 1bv9 | XV6 | Gag-Pol polyprotein | 3.4.23.16 | 0.474 | |
| 3sa6 | F71 | Protease | / | 0.474 | |
| 1a94 | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.473 | |
| 1hpo | UNI | Gag-Pol polyprotein | 3.4.23.16 | 0.473 | |
| 1hvj | A78 | Gag-Pol polyprotein | / | 0.473 | |
| 1hvs | A77 | Gag-Pol polyprotein | / | 0.473 | |
| 2bpy | 3IN | Gag-Pol polyprotein | 3.4.23.16 | 0.473 | |
| 2q64 | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.473 | |
| 3bva | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.473 | |
| 3em6 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.473 | |
| 3mxe | K54 | Gag-Pol polyprotein | 3.4.23.16 | 0.473 | |
| 3nxe | 2NC | Protease | / | 0.473 | |
| 3o9c | K20 | Pol polyprotein | / | 0.473 | |
| 3o9i | A61 | Gag-Pol polyprotein | / | 0.473 | |
| 3ok9 | G52 | Gag-Pol polyprotein | 3.4.23.16 | 0.473 | |
| 3oxc | ROC | Protease | / | 0.473 | |
| 1b6p | PI7 | Gag-Pol polyprotein | 3.4.23.16 | 0.472 | |
| 1ebw | BEI | Gag-Pol polyprotein | 3.4.23.16 | 0.472 | |
| 1g2k | NM1 | Gag-Pol polyprotein | 3.4.23.16 | 0.472 | |
| 1hpv | 478 | Gag-Pol polyprotein | / | 0.472 | |
| 1ivp | 1ZK | Gag-Pol polyprotein | / | 0.472 | |
| 1k2b | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.472 | |
| 2bbb | HH1 | Gag-Pol polyprotein | 3.4.23.16 | 0.472 | |
| 2qi7 | MZ9 | Gag-Pol polyprotein | / | 0.472 | |
| 3ckt | YDP | Gag-Pol polyprotein | 3.4.23.16 | 0.472 | |
| 3d20 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.472 | |
| 3qrs | NK8 | Gag-Pol polyprotein | 3.4.23.16 | 0.472 | |
| 1b6k | PI5 | Gag-Pol polyprotein | 3.4.23.16 | 0.471 | |
| 1bdq | IM1 | Gag-Pol polyprotein | 3.4.23.16 | 0.471 | |
| 1meu | DMP | Gag-Pol polyprotein | 3.4.23.16 | 0.471 | |
| 1rl8 | RIT | Gag-Pol polyprotein | 3.4.23.16 | 0.471 | |
| 1w5x | BE5 | Gag-Pol polyprotein | 3.4.23.16 | 0.471 | |
| 1zsf | 0ZS | Gag-Pol polyprotein | 3.4.23.16 | 0.471 | |
| 2idw | 017 | Protease | / | 0.471 | |
| 3el4 | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.471 | |
| 3o9a | K14 | Pol polyprotein | / | 0.471 | |
| 3vf7 | 031 | Gag-Pol polyprotein | 3.4.23.16 | 0.471 | |
| 1a8k | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.470 | |
| 1hvl | A76 | Gag-Pol polyprotein | / | 0.470 | |
| 3ecg | 065 | Gag-Pol polyprotein | 3.4.23.47 | 0.470 | |
| 4gb2 | 0LQ | Gag-Pol polyprotein | 2.7.7.49 | 0.470 | |
| 1ajv | NMB | Gag-Pol polyprotein | 3.4.23.16 | 0.469 | |
| 1c6x | 3IN | Protease | / | 0.469 | |
| 1hvk | A79 | Gag-Pol polyprotein | / | 0.469 | |
| 1hxb | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.469 | |
| 3ekv | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.469 | |
| 3mxd | K53 | Gag-Pol polyprotein | 3.4.23.16 | 0.469 | |
| 3sac | AF8 | Protease | / | 0.469 | |
| 3gi6 | D78 | Gag-Pol polyprotein | / | 0.468 | |
| 1hii | C20 | Gag-Pol polyprotein | / | 0.467 | |
| 4njt | 017 | Protease | / | 0.467 | |
| 1fg8 | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.466 | |
| 1k1u | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.466 | |
| 2qi4 | MZ6 | Gag-Pol polyprotein | / | 0.466 | |
| 2qnp | QN2 | Gag-Pol polyprotein | 3.4.23.16 | 0.466 | |
| 2r38 | G4G | Gag-Pol polyprotein | 3.4.23.16 | 0.466 | |
| 3hzc | 2NC | Protease | / | 0.466 | |
| 4j54 | G52 | Gag-Pol polyprotein | 3.4.23.16 | 0.466 | |
| 1b6m | PI6 | Gag-Pol polyprotein | 3.4.23.16 | 0.465 | |
| 3k4v | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.465 | |
| 4k4p | 3TL | Gag-Pol polyprotein | / | 0.465 | |
| 9hvp | 0E9 | Gag-Pol polyprotein | / | 0.465 | |
| 2ien | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.464 | |
| 2qi0 | MZ3 | Gag-Pol polyprotein | / | 0.464 | |
| 3wsj | MK1 | Protease | / | 0.464 | |
| 1hih | C20 | Gag-Pol polyprotein | / | 0.463 | |
| 1qbr | XV6 | Gag-Pol polyprotein | 3.4.23.16 | 0.463 | |
| 2p3a | 3TL | Pol protein | / | 0.463 | |
| 2q3k | MUW | Gag-Pol polyprotein | / | 0.463 | |
| 3ndt | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.463 | |
| 3nwx | KVS | Gag-Pol polyprotein | 3.4.23.16 | 0.463 | |
| 3sa4 | F72 | Protease | / | 0.463 | |
| 3sab | F78 | Protease | / | 0.463 | |
| 1c70 | L75 | Protease | / | 0.462 | |
| 1qbu | 846 | Gag-Pol polyprotein | 3.4.23.16 | 0.462 | |
| 2hs2 | 017 | Protease | / | 0.462 | |
| 3ndw | RIT | Gag-Pol polyprotein | 3.4.23.16 | 0.462 | |
| 3o9b | K2A | Pol polyprotein | / | 0.462 | |
| 3pwm | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.462 | |
| 1k2c | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.461 | |
| 1t3r | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.461 | |
| 3tog | 079 | Gag-Pol polyprotein | 2.7.7.49 | 0.461 | |
| 4dqe | 017 | Gag-Pol polyprotein | / | 0.461 | |
| 4i8z | G08 | Gag-Pol polyprotein | 3.4.23.16 | 0.461 | |
| 2p3d | 3TL | Protease | / | 0.460 | |
| 3sa8 | K83 | Protease | / | 0.460 | |
| 3ufn | ROC | Gag-Pol polyprotein | / | 0.460 | |
| 1ohr | 1UN | V-1 PROTEASE protein | / | 0.459 | |
| 2bpx | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.459 | |
| 2r3t | G4G | Gag-Pol polyprotein | 3.4.23.16 | 0.459 | |
| 3gi4 | K60 | Gag-Pol polyprotein | / | 0.459 | |
| 1d4s | TPV | Gag-Pol polyprotein | 3.4.23.16 | 0.458 | |
| 1fff | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.458 | |
| 1izi | Q50 | Gag-Pol polyprotein | 3.4.23.16 | 0.458 | |
| 1k6t | XN1 | Gag-Pol polyprotein | 3.4.23.16 | 0.458 | |
| 2qi6 | MZ8 | Gag-Pol polyprotein | / | 0.458 | |
| 7upj | INU | Gag-Pol polyprotein | 3.4.23.16 | 0.458 | |
| 1dw6 | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.457 | |
| 1met | DMP | Gag-Pol polyprotein | 3.4.23.16 | 0.457 | |
| 3r4b | 74T | Gag-Pol polyprotein | / | 0.457 | |
| 1sh9 | RIT | Gag-Pol polyprotein | 3.4.23.16 | 0.456 | |
| 2upj | U02 | Gag-Pol polyprotein | 3.4.23.16 | 0.456 | |
| 4dqb | 017 | Gag-Pol polyprotein | / | 0.456 | |
| 1gqt | ACP | Ribokinase | / | 0.454 | |
| 1m0b | 0ZQ | Gag-Pol polyprotein | 3.4.23.16 | 0.454 | |
| 3cic | 316 | Beta-secretase 1 | 3.4.23.46 | 0.454 | |
| 1bwb | 146 | Gag-Pol polyprotein | 3.4.23.16 | 0.453 | |
| 1kzk | JE2 | Gag-Pol polyprotein | 3.4.23.16 | 0.453 | |
| 2pqz | G0G | Gag-Pol polyprotein | 3.4.23.16 | 0.453 | |
| 2r43 | G3G | Gag-Pol polyprotein | 3.4.23.16 | 0.453 | |
| 3em3 | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.453 | |
| 2aid | THK | Gag-Pol polyprotein | 3.4.23.16 | 0.452 | |
| 2hm1 | LIQ | Beta-secretase 1 | 3.4.23.46 | 0.452 | |
| 2psu | MUU | Protease | / | 0.452 | |
| 2q55 | MU0 | Protease | / | 0.452 | |
| 3ekx | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.452 | |
| 2fle | AI | Protease | / | 0.451 | |
| 3cid | 318 | Beta-secretase 1 | 3.4.23.46 | 0.451 | |
| 3dck | KVI | Protease | / | 0.451 | |
| 3upj | U03 | Gag-Pol polyprotein | / | 0.451 | |
| 1ajx | AH1 | Gag-Pol polyprotein | 3.4.23.16 | 0.450 | |
| 1qrp | HH0 | Pepsin A-4 | 3.4.23.1 | 0.450 | |
| 2nnp | ROC | Protease | / | 0.450 | |
| 3o9e | A60 | Pol polyprotein | / | 0.450 | |
| 3qro | NK9 | Gag-Pol polyprotein | 3.4.23.16 | 0.450 | |
| 3vyd | VYD | Renin | 3.4.23.15 | 0.450 | |
| 1ff0 | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.449 | |
| 1lf2 | R37 | Plasmepsin-2 | 3.4.23.39 | 0.449 | |
| 1siv | PSI | Gag-Pol polyprotein | / | 0.449 | |
| 1z1h | HBB | Gag-Pol polyprotein | 3.4.23.16 | 0.449 | |
| 3qbf | JHG | Gag-Pol polyprotein | 3.4.23.16 | 0.449 | |
| 3qih | NI7 | Gag-Pol polyprotein | 3.4.23.16 | 0.449 | |
| 3vsw | R31 | Renin | 3.4.23.15 | 0.449 | |
| 3vsx | R32 | Renin | 3.4.23.15 | 0.449 | |
| 2f81 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.448 | |
| 2qi1 | MZ4 | Gag-Pol polyprotein | / | 0.448 | |
| 3gw9 | VNI | Lanosterol 14-alpha-demethylase | / | 0.448 | |
| 1rne | C60 | Renin | 3.4.23.15 | 0.447 | |
| 2a1e | IPF | Gag-Pol polyprotein | 3.4.23.16 | 0.447 | |
| 3lzs | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.447 | |
| 3r2f | PB0 | Beta-secretase 1 | 3.4.23.46 | 0.447 | |
| 4i0h | 1BL | Beta-secretase 1 | 3.4.23.46 | 0.447 | |
| 4upj | U04 | Gag-Pol polyprotein | / | 0.447 | |
| 1z1r | HBH | Gag-Pol polyprotein | 3.4.23.16 | 0.446 | |
| 2pwc | G3G | Gag-Pol polyprotein | 3.4.23.16 | 0.446 | |
| 3el0 | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.446 | |
| 3o9f | K2D | Gag-Pol polyprotein | / | 0.446 | |
| 4h3j | 10W | Beta-secretase 1 | 3.4.23.46 | 0.446 | |
| 2o4p | TPV | Protease | / | 0.445 | |
| 3lpj | Z75 | Beta-secretase 1 | 3.4.23.46 | 0.445 | |
| 3s56 | ROC | Protease | / | 0.445 | |
| 2psv | MUV | Protease | / | 0.444 | |
| 3nwq | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.444 | |
| 3vyf | VYF | Renin | 3.4.23.15 | 0.444 | |
| 1b6l | PI4 | Gag-Pol polyprotein | 3.4.23.16 | 0.443 | |
| 1k6c | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.443 | |
| 1qbt | 146 | Gag-Pol polyprotein | 3.4.23.16 | 0.443 | |
| 4frk | DWD | Beta-secretase 1 | 3.4.23.46 | 0.443 | |
| 1hwr | 216 | Gag-Pol polyprotein | 3.4.23.16 | 0.442 | |
| 3bxr | DRR | Gag-Pol polyprotein | 3.4.23.16 | 0.442 | |
| 3t2z | FAD | Sulfide-quinone reductase | / | 0.442 | |
| 1mrx | K57 | Gag-Pol polyprotein | 3.4.23.16 | 0.441 | |
| 2pwr | G4G | Gag-Pol polyprotein | 3.4.23.16 | 0.440 | |
| 2r3w | G3G | Gag-Pol polyprotein | 3.4.23.16 | 0.440 | |
| 3vuc | HHE | Renin | 3.4.23.15 | 0.440 |