scPDB - Distribution of Binding site Similarity values of 3sf6 entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
3sf6	FDA	Glutaryl-CoA dehydrogenase

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
3sf6	FDA	Glutaryl-CoA dehydrogenase	/	1.000
1siq	FAD	Glutaryl-CoA dehydrogenase, mitochondrial	1.3.8.6	0.573
2dvl	FAD	Acyl-CoA dehydrogenase	/	0.489
1ege	FAD	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1.3.8.7	0.473
3mpi	FAD	Glutaryl-CoA dehydrogenase	1.3.99.32	0.467
2eba	FAD	Putative glutaryl-CoA dehydrogenase	/	0.466
1udy	FAD	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	1.3.8.7	0.458
2d29	FAD	Acyl-CoA dehydrogenase	/	0.451
3owa	FAD	Acyl-CoA dehydrogenase	/	0.442