scPDB - Distribution of Binding site Similarity values of 3rmw entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
3rmw	UPG	Glycogenin-1	2.4.1.186

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
3rmw	UPG	Glycogenin-1	2.4.1.186	1.000
1zdg	UPG	Glycogenin-1	2.4.1.186	0.558
1zdf	UPG	Glycogenin-1	2.4.1.186	0.526
3t7o	UPG	Glycogenin-1	2.4.1.186	0.523
1j39	UPG	DNA beta-glucosyltransferase	/	0.459
3u2x	ASO	Glycogenin-1	2.4.1.186	0.458
5dhh	DGW	Nociceptin receptor	/	0.453
3e8e	G98	cAMP-dependent protein kinase catalytic subunit alpha	2.7.11.11	0.452
3gjw	GJW	Poly [ADP-ribose] polymerase 1	2.4.2.30	0.452
3jsz	UPG	Uncharacterized protein	/	0.442
2xsz	ATP	RuvB-like 2	3.6.4.12	0.441