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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3rahO1ZCyclin-dependent kinase 22.7.11.22

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
3rahO1ZCyclin-dependent kinase 22.7.11.221.000
3r9nZ68Cyclin-dependent kinase 22.7.11.220.667
3rpr25ZCyclin-dependent kinase 22.7.11.220.628
3r8vZ62Cyclin-dependent kinase 22.7.11.220.597
3r71X86Cyclin-dependent kinase 22.7.11.220.572
1w8cN69Cyclin-dependent kinase 22.7.11.220.562
3r83Z14Cyclin-dependent kinase 22.7.11.220.549
1e1xNW1Cyclin-dependent kinase 22.7.11.220.532
3qx2X63Cyclin-dependent kinase 22.7.11.220.531
3r73X87Cyclin-dependent kinase 22.7.11.220.531
2c6o4SPCyclin-dependent kinase 22.7.11.220.530
4kd11QKCyclin-dependent kinase 22.7.11.220.530
3lfnA27Cyclin-dependent kinase 22.7.11.220.526
3rpo24ZCyclin-dependent kinase 22.7.11.220.524
1h0w207Cyclin-dependent kinase 22.7.11.220.523
3iggEFQCyclin-dependent kinase 22.7.11.220.517
2c69CT8Cyclin-dependent kinase 22.7.11.220.515
3r8uZ31Cyclin-dependent kinase 22.7.11.220.513
2r3fSC8Cyclin-dependent kinase 22.7.11.220.510
3qruX19Cyclin-dependent kinase 22.7.11.220.507
3r7yZ04Cyclin-dependent kinase 22.7.11.220.506
2c68CT6Cyclin-dependent kinase 22.7.11.220.501
3qwjX6ACyclin-dependent kinase 22.7.11.220.501
3raiX85Cyclin-dependent kinase 22.7.11.220.498
3qtsX46Cyclin-dependent kinase 22.7.11.220.497
2c6mDT5Cyclin-dependent kinase 22.7.11.220.495
2w06FRVCyclin-dependent kinase 22.7.11.220.495
2r3gSC9Cyclin-dependent kinase 22.7.11.220.491
3qqlX03Cyclin-dependent kinase 22.7.11.220.490
3s0o50ZCyclin-dependent kinase 22.7.11.220.489
2vtpLZ9Cyclin-dependent kinase 22.7.11.220.488
2vtsLZCCyclin-dependent kinase 22.7.11.220.487
3rm719ZCyclin-dependent kinase 22.7.11.220.487
2a4lRRCCyclin-dependent kinase 22.7.11.220.484
3rm618ZCyclin-dependent kinase 22.7.11.220.484
1pxmCK5Cyclin-dependent kinase 22.7.11.220.483
2c6iDT1Cyclin-dependent kinase 22.7.11.220.480
2c6lDT4Cyclin-dependent kinase 22.7.11.220.480
3r1sX73Cyclin-dependent kinase 22.7.11.220.480
1v1k3FPCyclin-dependent kinase 22.7.11.220.478
2c6kDT2Cyclin-dependent kinase 22.7.11.220.478
3lfqA28Cyclin-dependent kinase 22.7.11.220.478
3qzgX67Cyclin-dependent kinase 22.7.11.220.478
2a0cCK9Cyclin-dependent kinase 22.7.11.220.477
3wblPDYCyclin-dependent kinase 22.7.11.220.473
2r3r6SCCyclin-dependent kinase 22.7.11.220.472
1g5sI17Cyclin-dependent kinase 22.7.11.220.471
2r3kSCQCyclin-dependent kinase 22.7.11.220.471
3ezrEZRCyclin-dependent kinase 22.7.11.220.471
3qqkX02Cyclin-dependent kinase 22.7.11.220.471
3r9hZ67Cyclin-dependent kinase 22.7.11.220.470
2exmZIPCyclin-dependent kinase 22.7.11.220.469
2r3mSCXCyclin-dependent kinase 22.7.11.220.469
3qzhX69Cyclin-dependent kinase 22.7.11.220.469
2vtoLZ8Cyclin-dependent kinase 22.7.11.220.468
3r8lZ30Cyclin-dependent kinase 22.7.11.220.468
3r8pZ46Cyclin-dependent kinase 22.7.11.220.467
3qtrX36Cyclin-dependent kinase 22.7.11.220.465
3r7vZ02Cyclin-dependent kinase 22.7.11.220.465
3s00Z60Cyclin-dependent kinase 22.7.11.220.464
2r3o2SCCyclin-dependent kinase 22.7.11.220.463
2w1hL0FCyclin-dependent kinase 22.7.11.220.463
3r1yX76Cyclin-dependent kinase 22.7.11.220.463
3rk909ZCyclin-dependent kinase 22.7.11.220.463
4fklCK2Cyclin-dependent kinase 22.7.11.220.463
3s2pPMUCyclin-dependent kinase 22.7.11.220.460
4eor4SPCyclin-dependent kinase 22.7.11.220.460
3pj8404Cyclin-dependent kinase 22.7.11.220.459
3qxoX65Cyclin-dependent kinase 22.7.11.220.459
1gz8MBPCyclin-dependent kinase 22.7.11.220.456
4fkr45KCyclin-dependent kinase 22.7.11.220.456
3qqhX0ACyclin-dependent kinase 22.7.11.220.455
2b55D31Cyclin-dependent kinase 22.7.11.220.454
3lfsA07Cyclin-dependent kinase 22.7.11.220.453
3r28XA0Cyclin-dependent kinase 22.7.11.220.453
3s1h56ZCyclin-dependent kinase 22.7.11.220.452
3qtuX44Cyclin-dependent kinase 22.7.11.220.451
3r6xX84Cyclin-dependent kinase 22.7.11.220.450
4fkv61KCyclin-dependent kinase 22.7.11.220.450
3rk708ZCyclin-dependent kinase 22.7.11.220.449
2r3iSCFCyclin-dependent kinase 22.7.11.220.448
3ig7EFPCyclin-dependent kinase 22.7.11.220.447
3rni21ZCyclin-dependent kinase 22.7.11.220.447
2vu3LZECyclin-dependent kinase 22.7.11.220.446
3ddqRRCCyclin-dependent kinase 22.7.11.220.446
4ek816KCyclin-dependent kinase 22.7.11.220.445
3roy22ZCyclin-dependent kinase 22.7.11.220.444
1oitHDTCyclin-dependent kinase 22.7.11.220.443
2uzoC62Cyclin-dependent kinase 22.7.11.220.443
3qqfX07Cyclin-dependent kinase 22.7.11.220.442
3rak03ZCyclin-dependent kinase 22.7.11.220.442
3rpv26ZCyclin-dependent kinase 22.7.11.220.442
1gii1PUCyclin-dependent kinase 22.7.11.220.440
5aniES4Cyclin-dependent kinase 22.7.11.220.440