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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3qwjX6ACyclin-dependent kinase 22.7.11.22

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3qwjX6ACyclin-dependent kinase 22.7.11.221.000
3qx2X63Cyclin-dependent kinase 22.7.11.220.611
3r1qX75Cyclin-dependent kinase 22.7.11.220.610
3rk909ZCyclin-dependent kinase 22.7.11.220.608
4lyn1YGCyclin-dependent kinase 22.7.11.220.602
3qxoX65Cyclin-dependent kinase 22.7.11.220.600
3roy22ZCyclin-dependent kinase 22.7.11.220.594
3qwkX62Cyclin-dependent kinase 22.7.11.220.592
3r7yZ04Cyclin-dependent kinase 22.7.11.220.591
3rm719ZCyclin-dependent kinase 22.7.11.220.588
3r6xX84Cyclin-dependent kinase 22.7.11.220.586
3r28XA0Cyclin-dependent kinase 22.7.11.220.584
3r7iX9ICyclin-dependent kinase 22.7.11.220.584
3qruX19Cyclin-dependent kinase 22.7.11.220.582
3qziX72Cyclin-dependent kinase 22.7.11.220.580
3rm618ZCyclin-dependent kinase 22.7.11.220.580
3r73X87Cyclin-dependent kinase 22.7.11.220.579
3r7vZ02Cyclin-dependent kinase 22.7.11.220.579
3qu0X40Cyclin-dependent kinase 22.7.11.220.578
3iggEFQCyclin-dependent kinase 22.7.11.220.577
3r8vZ62Cyclin-dependent kinase 22.7.11.220.576
3qqfX07Cyclin-dependent kinase 22.7.11.220.570
3rkb12ZCyclin-dependent kinase 22.7.11.220.568
3rpo24ZCyclin-dependent kinase 22.7.11.220.566
2fvdLIACyclin-dependent kinase 22.7.11.220.565
3qzhX69Cyclin-dependent kinase 22.7.11.220.564
3r1sX73Cyclin-dependent kinase 22.7.11.220.563
1ckpPVBCyclin-dependent kinase 22.7.11.220.562
2r64740Cyclin-dependent kinase 22.7.11.220.562
3raiX85Cyclin-dependent kinase 22.7.11.220.558
2a0cCK9Cyclin-dependent kinase 22.7.11.220.557
3r1yX76Cyclin-dependent kinase 22.7.11.220.555
3r7uX96Cyclin-dependent kinase 22.7.11.220.551
1v1k3FPCyclin-dependent kinase 22.7.11.220.548
3r71X86Cyclin-dependent kinase 22.7.11.220.545
3r83Z14Cyclin-dependent kinase 22.7.11.220.545
3rahO1ZCyclin-dependent kinase 22.7.11.220.545
3rpv26ZCyclin-dependent kinase 22.7.11.220.545
4fki09KCyclin-dependent kinase 22.7.11.220.542
3r9hZ67Cyclin-dependent kinase 22.7.11.220.539
3qqlX03Cyclin-dependent kinase 22.7.11.220.538
3qtzX42Cyclin-dependent kinase 22.7.11.220.535
3sqq99ZCyclin-dependent kinase 22.7.11.220.535
1h1r6CPCyclin-dependent kinase 22.7.11.220.532
4kd11QKCyclin-dependent kinase 22.7.11.220.532
3s0o50ZCyclin-dependent kinase 22.7.11.220.531
1w0xOLOCyclin-dependent kinase 22.7.11.220.530
1w8cN69Cyclin-dependent kinase 22.7.11.220.530
3qzgX67Cyclin-dependent kinase 22.7.11.220.529
3qqhX0ACyclin-dependent kinase 22.7.11.220.528
3ral04ZCyclin-dependent kinase 22.7.11.220.527
4fkpLS5Cyclin-dependent kinase 22.7.11.220.527
2b55D31Cyclin-dependent kinase 22.7.11.220.526
4fkq42KCyclin-dependent kinase 22.7.11.220.526
2c6o4SPCyclin-dependent kinase 22.7.11.220.525
2vtpLZ9Cyclin-dependent kinase 22.7.11.220.524
3ezrEZRCyclin-dependent kinase 22.7.11.220.524
3qqkX02Cyclin-dependent kinase 22.7.11.220.524
3r9dX6BCyclin-dependent kinase 22.7.11.220.524
1pxkCK3Cyclin-dependent kinase 22.7.11.220.523
4ez30S0Cyclin-dependent kinase 22.7.11.220.523
2r3kSCQCyclin-dependent kinase 22.7.11.220.522
1fvt106Cyclin-dependent kinase 22.7.11.220.521
3qtrX36Cyclin-dependent kinase 22.7.11.220.521
3s2pPMUCyclin-dependent kinase 22.7.11.220.520
1p2a5BNCyclin-dependent kinase 22.7.11.220.519
2w06FRVCyclin-dependent kinase 22.7.11.220.519
2c69CT8Cyclin-dependent kinase 22.7.11.220.518
3rak03ZCyclin-dependent kinase 22.7.11.220.518
4fkr45KCyclin-dependent kinase 22.7.11.220.517
3qtqX35Cyclin-dependent kinase 22.7.11.220.516
1ke6LS2Cyclin-dependent kinase 22.7.11.220.515
2btrU73Cyclin-dependent kinase 22.7.11.220.515
3ig7EFPCyclin-dependent kinase 22.7.11.220.515
4fkj11KCyclin-dependent kinase 22.7.11.220.515
4erwSTUCyclin-dependent kinase 22.7.11.220.514
2duv371Cyclin-dependent kinase 22.7.11.220.513
2a4lRRCCyclin-dependent kinase 22.7.11.220.512
3pj8404Cyclin-dependent kinase 22.7.11.220.512
3r7eX88Cyclin-dependent kinase 22.7.11.220.512
3r8pZ46Cyclin-dependent kinase 22.7.11.220.512
3sw418KCyclin-dependent kinase 22.7.11.220.512
2vu3LZECyclin-dependent kinase 22.7.11.220.511
2w05FRTCyclin-dependent kinase 22.7.11.220.511
3dogNNNCyclin-dependent kinase 22.7.11.220.511
3s1h56ZCyclin-dependent kinase 22.7.11.220.511
3ti1B49Cyclin-dependent kinase 22.7.11.220.511
1oitHDTCyclin-dependent kinase 22.7.11.220.510
3qx4X4BCyclin-dependent kinase 22.7.11.220.510
3rpr25ZCyclin-dependent kinase 22.7.11.220.510
3lfnA27Cyclin-dependent kinase 22.7.11.220.508
2wpa889Cyclin-dependent kinase 22.7.11.220.507
3qtxX43Cyclin-dependent kinase 22.7.11.220.507
3r8zZ63Cyclin-dependent kinase 22.7.11.220.506
1di8DTQCyclin-dependent kinase 22.7.11.220.505
4fx360KCyclin-dependent kinase 22.7.11.220.505
1oguST8Cyclin-dependent kinase 22.7.11.220.504
1oiqHDUCyclin-dependent kinase 22.7.11.220.504
1ke5LS1Cyclin-dependent kinase 22.7.11.220.503
2vtoLZ8Cyclin-dependent kinase 22.7.11.220.503
1pxmCK5Cyclin-dependent kinase 22.7.11.220.502
2c6iDT1Cyclin-dependent kinase 22.7.11.220.502
3ezvEZVCyclin-dependent kinase 22.7.11.220.502
3qtuX44Cyclin-dependent kinase 22.7.11.220.502
3rk708ZCyclin-dependent kinase 22.7.11.220.502
3qrtX14Cyclin-dependent kinase 22.7.11.220.501
1vyzN5BCyclin-dependent kinase 22.7.11.220.500
2r3gSC9Cyclin-dependent kinase 22.7.11.220.500
2b52D42Cyclin-dependent kinase 22.7.11.220.499
2r3p3SCCyclin-dependent kinase 22.7.11.220.499
3lfsA07Cyclin-dependent kinase 22.7.11.220.499
4ek816KCyclin-dependent kinase 22.7.11.220.499
4eor4SPCyclin-dependent kinase 22.7.11.220.499
3ddpRC8Cyclin-dependent kinase 22.7.11.220.498
1ykr628Cyclin-dependent kinase 22.7.11.220.497
2c6mDT5Cyclin-dependent kinase 22.7.11.220.497
3rni21ZCyclin-dependent kinase 22.7.11.220.497
1h1s4SPCyclin-dependent kinase 22.7.11.220.496
3rjc06ZCyclin-dependent kinase 22.7.11.220.496
3rk507ZCyclin-dependent kinase 22.7.11.220.496
2xmyCDKCyclin-dependent kinase 22.7.11.220.495
3ddqRRCCyclin-dependent kinase 22.7.11.220.495
4acm7YGCyclin-dependent kinase 22.7.11.220.495
1h1q2A6Cyclin-dependent kinase 22.7.11.220.494
2r3mSCXCyclin-dependent kinase 22.7.11.220.494
1gih1PUCyclin-dependent kinase 22.7.11.220.493
3qxpX64Cyclin-dependent kinase 22.7.11.220.493
1h1pCMGCyclin-dependent kinase 22.7.11.220.491
1vyw292Cyclin-dependent kinase 22.7.11.220.491
2btsU32Cyclin-dependent kinase 22.7.11.220.491
4bcpT3CCyclin-dependent kinase 22.7.11.220.491
3pxyJWSCyclin-dependent kinase 22.7.11.220.490
3tiz3TICyclin-dependent kinase 22.7.11.220.489
4bcnT9NCyclin-dependent kinase 22.7.11.220.489
1g5sI17Cyclin-dependent kinase 22.7.11.220.488
1urwI1PCyclin-dependent kinase 22.7.11.220.488
3s00Z60Cyclin-dependent kinase 22.7.11.220.488
3py0SU9Cyclin-dependent kinase 22.7.11.220.487
3r8lZ30Cyclin-dependent kinase 22.7.11.220.487
3ql8X01Cyclin-dependent kinase 22.7.11.220.486
2uznC96Cyclin-dependent kinase 22.7.11.220.485
2uzoC62Cyclin-dependent kinase 22.7.11.220.485
2r3lSCWCyclin-dependent kinase 22.7.11.220.484
2r3o2SCCyclin-dependent kinase 22.7.11.220.484
2iw6QQ2Cyclin-dependent kinase 22.7.11.220.483
4fkw62KCyclin-dependent kinase 22.7.11.220.483
2iw84SPCyclin-dependent kinase 22.7.11.220.482
4bgh3I6Cyclin-dependent kinase 22.7.11.220.481
1ke7LS3Cyclin-dependent kinase 22.7.11.220.480
1oi9N20Cyclin-dependent kinase 22.7.11.220.480
2w1hL0FCyclin-dependent kinase 22.7.11.220.480
1ke8LS4Cyclin-dependent kinase 22.7.11.220.479
2r3r6SCCyclin-dependent kinase 22.7.11.220.479
2vtiLZ3Cyclin-dependent kinase 22.7.11.220.479
2c4g514Cyclin-dependent kinase 22.7.11.220.478
3my5RFZCyclin-dependent kinase 22.7.11.220.478
3unj0BXCyclin-dependent kinase 22.7.11.220.478
1ke9LS5Cyclin-dependent kinase 22.7.11.220.477
3wblPDYCyclin-dependent kinase 22.7.11.220.477
2r3fSC8Cyclin-dependent kinase 22.7.11.220.475
2wxvWXVCyclin-dependent kinase 22.7.11.220.475
4eol1ROCyclin-dependent kinase 22.7.11.220.475
4fko20KCyclin-dependent kinase 22.7.11.220.475
2vtsLZCCyclin-dependent kinase 22.7.11.220.473
2wihP48Cyclin-dependent kinase 22.7.11.220.473
3unk0BYCyclin-dependent kinase 22.7.11.220.473
4ek610KCyclin-dependent kinase 22.7.11.220.473
1pxlCK4Cyclin-dependent kinase 22.7.11.220.472
3r8uZ31Cyclin-dependent kinase 22.7.11.220.472
2vtjLZ4Cyclin-dependent kinase 22.7.11.220.471
4bcoT6QCyclin-dependent kinase 22.7.11.220.471
1oiuN76Cyclin-dependent kinase 22.7.11.220.470
2vtnLZ7Cyclin-dependent kinase 22.7.11.220.470
3rmf20ZCyclin-dependent kinase 22.7.11.220.470
4bcmT7ZCyclin-dependent kinase 22.7.11.220.470
1h0w207Cyclin-dependent kinase 22.7.11.220.469
1oiyN41Cyclin-dependent kinase 22.7.11.220.469
3qzfX66Cyclin-dependent kinase 22.7.11.220.468
1e9hINRCyclin-dependent kinase 22.7.11.220.466
2i40BLZCyclin-dependent kinase 22.7.11.220.465
1gii1PUCyclin-dependent kinase 22.7.11.220.464
1hckATPCyclin-dependent kinase 22.7.11.220.463
2cchATPCyclin-dependent kinase 22.7.11.220.463
3r9nZ68Cyclin-dependent kinase 22.7.11.220.463
4bcqTJFCyclin-dependent kinase 22.7.11.220.463
2bheBRYCyclin-dependent kinase 22.7.11.220.462
3rpy27ZCyclin-dependent kinase 22.7.11.220.462
4fks46KCyclin-dependent kinase 22.7.11.220.462
2r3iSCFCyclin-dependent kinase 22.7.11.220.461
2iw94SPCyclin-dependent kinase 22.7.11.220.460
3le62BZCyclin-dependent kinase 22.7.11.220.459
4eon1ROCyclin-dependent kinase 22.7.11.220.459
2vv9IM9Cyclin-dependent kinase 22.7.11.220.458
3fz1B98Cyclin-dependent kinase 22.7.11.220.458
1unlRRCCyclin-dependent-like kinase 52.7.11.10.457
2vttLZDCyclin-dependent kinase 22.7.11.220.457
1oirHDYCyclin-dependent kinase 22.7.11.220.455
2j9mPY8Cyclin-dependent kinase 22.7.11.220.455
4cfnJYMCyclin-dependent kinase 22.7.11.220.455
1h0vUN4Cyclin-dependent kinase 22.7.11.220.454
4qmpDKISerine/threonine-protein kinase 242.7.11.10.453
2xnbY8LCyclin-dependent kinase 22.7.11.220.450
2c68CT6Cyclin-dependent kinase 22.7.11.220.449
3qtwX3ACyclin-dependent kinase 22.7.11.220.449
4eos1ROCyclin-dependent kinase 22.7.11.220.449
2w17I19Cyclin-dependent kinase 22.7.11.220.448
3rzb02ZCyclin-dependent kinase 22.7.11.220.447
1pxpCK8Cyclin-dependent kinase 22.7.11.220.446
3qtsX46Cyclin-dependent kinase 22.7.11.220.446
1pkdUCNCyclin-dependent kinase 22.7.11.220.445
4eok4SPCyclin-dependent kinase 22.7.11.220.445
2vtlLZ5Cyclin-dependent kinase 22.7.11.220.444
2x1nX1NCyclin-dependent kinase 22.7.11.220.444
1r78FMDCyclin-dependent kinase 22.7.11.220.443
3o0g3O0Cyclin-dependent-like kinase 52.7.11.10.443
4fkt48KCyclin-dependent kinase 22.7.11.220.443
1aq1STUCyclin-dependent kinase 22.7.11.220.442
1e1xNW1Cyclin-dependent kinase 22.7.11.220.442
3sw719KCyclin-dependent kinase 22.7.11.220.442
2vtqLZACyclin-dependent kinase 22.7.11.220.441
2exmZIPCyclin-dependent kinase 22.7.11.220.440
4kioG5KTyrosine-protein kinase ITK/TSK2.7.10.20.440