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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3qtsX46Cyclin-dependent kinase 22.7.11.22

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
3qtsX46Cyclin-dependent kinase 22.7.11.221.000
3r9nZ68Cyclin-dependent kinase 22.7.11.220.621
3rpr25ZCyclin-dependent kinase 22.7.11.220.599
3rahO1ZCyclin-dependent kinase 22.7.11.220.562
2c6iDT1Cyclin-dependent kinase 22.7.11.220.557
3qtrX36Cyclin-dependent kinase 22.7.11.220.546
3r8vZ62Cyclin-dependent kinase 22.7.11.220.539
3r9dX6BCyclin-dependent kinase 22.7.11.220.525
4kd11QKCyclin-dependent kinase 22.7.11.220.525
1w8cN69Cyclin-dependent kinase 22.7.11.220.523
3r8pZ46Cyclin-dependent kinase 22.7.11.220.515
3qx2X63Cyclin-dependent kinase 22.7.11.220.514
2c69CT8Cyclin-dependent kinase 22.7.11.220.510
3rm719ZCyclin-dependent kinase 22.7.11.220.505
3r71X86Cyclin-dependent kinase 22.7.11.220.504
3rak03ZCyclin-dependent kinase 22.7.11.220.504
2c6o4SPCyclin-dependent kinase 22.7.11.220.499
3raiX85Cyclin-dependent kinase 22.7.11.220.499
3s1h56ZCyclin-dependent kinase 22.7.11.220.499
3s2pPMUCyclin-dependent kinase 22.7.11.220.496
1h0w207Cyclin-dependent kinase 22.7.11.220.495
3qruX19Cyclin-dependent kinase 22.7.11.220.494
4fko20KCyclin-dependent kinase 22.7.11.220.493
2fvdLIACyclin-dependent kinase 22.7.11.220.492
2vtsLZCCyclin-dependent kinase 22.7.11.220.491
4acm7YGCyclin-dependent kinase 22.7.11.220.490
2vtoLZ8Cyclin-dependent kinase 22.7.11.220.488
1g5sI17Cyclin-dependent kinase 22.7.11.220.485
2vtpLZ9Cyclin-dependent kinase 22.7.11.220.484
3r7yZ04Cyclin-dependent kinase 22.7.11.220.484
3r8uZ31Cyclin-dependent kinase 22.7.11.220.484
2r3fSC8Cyclin-dependent kinase 22.7.11.220.482
3pxyJWSCyclin-dependent kinase 22.7.11.220.480
3s00Z60Cyclin-dependent kinase 22.7.11.220.480
3qxpX64Cyclin-dependent kinase 22.7.11.220.479
5aaaVGHALK tyrosine kinase receptor2.7.10.10.479
2a0cCK9Cyclin-dependent kinase 22.7.11.220.478
3r8lZ30Cyclin-dependent kinase 22.7.11.220.478
3rpv26ZCyclin-dependent kinase 22.7.11.220.478
3iggEFQCyclin-dependent kinase 22.7.11.220.477
2r3iSCFCyclin-dependent kinase 22.7.11.220.476
3rm618ZCyclin-dependent kinase 22.7.11.220.476
3lfsA07Cyclin-dependent kinase 22.7.11.220.474
2c68CT6Cyclin-dependent kinase 22.7.11.220.473
3qzgX67Cyclin-dependent kinase 22.7.11.220.473
3r73X87Cyclin-dependent kinase 22.7.11.220.472
4bgh3I6Cyclin-dependent kinase 22.7.11.220.472
2r3kSCQCyclin-dependent kinase 22.7.11.220.470
3qwjX6ACyclin-dependent kinase 22.7.11.220.470
1w0xOLOCyclin-dependent kinase 22.7.11.220.468
2r3r6SCCyclin-dependent kinase 22.7.11.220.468
3amaSKEcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.467
3rk909ZCyclin-dependent kinase 22.7.11.220.467
4fkr45KCyclin-dependent kinase 22.7.11.220.467
3qqhX0ACyclin-dependent kinase 22.7.11.220.465
1fvt106Cyclin-dependent kinase 22.7.11.220.464
2r3q5SCCyclin-dependent kinase 22.7.11.220.464
3qzhX69Cyclin-dependent kinase 22.7.11.220.464
3unk0BYCyclin-dependent kinase 22.7.11.220.464
2btrU73Cyclin-dependent kinase 22.7.11.220.463
1di8DTQCyclin-dependent kinase 22.7.11.220.462
1h1r6CPCyclin-dependent kinase 22.7.11.220.462
1oitHDTCyclin-dependent kinase 22.7.11.220.462
2c6mDT5Cyclin-dependent kinase 22.7.11.220.462
4b8lA0PAurora kinase B-A2.7.11.10.462
1pxmCK5Cyclin-dependent kinase 22.7.11.220.461
2w1hL0FCyclin-dependent kinase 22.7.11.220.461
1ke6LS2Cyclin-dependent kinase 22.7.11.220.460
3qtxX43Cyclin-dependent kinase 22.7.11.220.460
3r1sX73Cyclin-dependent kinase 22.7.11.220.460
3rpo24ZCyclin-dependent kinase 22.7.11.220.460
1ke5LS1Cyclin-dependent kinase 22.7.11.220.458
3qtuX44Cyclin-dependent kinase 22.7.11.220.458
3r7vZ02Cyclin-dependent kinase 22.7.11.220.458
3rjc06ZCyclin-dependent kinase 22.7.11.220.458
3roy22ZCyclin-dependent kinase 22.7.11.220.458
2b55D31Cyclin-dependent kinase 22.7.11.220.457
2r3o2SCCyclin-dependent kinase 22.7.11.220.456
3r9hZ67Cyclin-dependent kinase 22.7.11.220.456
1ckpPVBCyclin-dependent kinase 22.7.11.220.455
2i40BLZCyclin-dependent kinase 22.7.11.220.455
3r1yX76Cyclin-dependent kinase 22.7.11.220.455
3rk507ZCyclin-dependent kinase 22.7.11.220.455
3rni21ZCyclin-dependent kinase 22.7.11.220.455
3ezvEZVCyclin-dependent kinase 22.7.11.220.454
3sw719KCyclin-dependent kinase 22.7.11.220.454
4fx360KCyclin-dependent kinase 22.7.11.220.454
2xb7GUIALK tyrosine kinase receptor2.7.10.10.453
3r7eX88Cyclin-dependent kinase 22.7.11.220.452
4fkq42KCyclin-dependent kinase 22.7.11.220.452
2uzoC62Cyclin-dependent kinase 22.7.11.220.451
3v5l0G1Tyrosine-protein kinase ITK/TSK2.7.10.20.451
4kioG5KTyrosine-protein kinase ITK/TSK2.7.10.20.451
1v1k3FPCyclin-dependent kinase 22.7.11.220.450
5dt0SKEAurora kinase A2.7.11.10.450
2r3mSCXCyclin-dependent kinase 22.7.11.220.449
4e5yNDPGDP-L-fucose synthase1.1.1.2710.449
3ambVX6cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.448
3qtzX42Cyclin-dependent kinase 22.7.11.220.448
3r28XA0Cyclin-dependent kinase 22.7.11.220.448
3rkb12ZCyclin-dependent kinase 22.7.11.220.448
2vv9IM9Cyclin-dependent kinase 22.7.11.220.447
3wblPDYCyclin-dependent kinase 22.7.11.220.447
3rk708ZCyclin-dependent kinase 22.7.11.220.446
3u4uLNHCasein kinase II subunit alpha2.7.11.10.446
1h1s4SPCyclin-dependent kinase 22.7.11.220.445
3my5RFZCyclin-dependent kinase 22.7.11.220.445
3ral04ZCyclin-dependent kinase 22.7.11.220.445
3unj0BXCyclin-dependent kinase 22.7.11.220.445
4qmpDKISerine/threonine-protein kinase 242.7.11.10.445
3py0SU9Cyclin-dependent kinase 22.7.11.220.444
3r6xX84Cyclin-dependent kinase 22.7.11.220.444
4ek610KCyclin-dependent kinase 22.7.11.220.444
4fkpLS5Cyclin-dependent kinase 22.7.11.220.444
3pj8404Cyclin-dependent kinase 22.7.11.220.443
4lyn1YGCyclin-dependent kinase 22.7.11.220.443
2c6lDT4Cyclin-dependent kinase 22.7.11.220.442
2vu3LZECyclin-dependent kinase 22.7.11.220.442
2wpa889Cyclin-dependent kinase 22.7.11.220.442
3ddpRC8Cyclin-dependent kinase 22.7.11.220.442
3qwkX62Cyclin-dependent kinase 22.7.11.220.442
3qxoX65Cyclin-dependent kinase 22.7.11.220.442
3sw418KCyclin-dependent kinase 22.7.11.220.442
4gmy0X5Tyrosine-protein kinase JAK2/0.442
4mf129YTyrosine-protein kinase ITK/TSK2.7.10.20.442
4mq12C3Dual specificity tyrosine-phosphorylation-regulated kinase 1A2.7.12.10.442
1ke9LS5Cyclin-dependent kinase 22.7.11.220.441
3rzb02ZCyclin-dependent kinase 22.7.11.220.441
3zewSTUEphrin type-B receptor 42.7.10.10.441
2b54D05Cyclin-dependent kinase 22.7.11.220.440
2c4g514Cyclin-dependent kinase 22.7.11.220.440
3r83Z14Cyclin-dependent kinase 22.7.11.220.440
3sqq99ZCyclin-dependent kinase 22.7.11.220.440
4eor4SPCyclin-dependent kinase 22.7.11.220.440