Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
3qts | X46 | Cyclin-dependent kinase 2 | 2.7.11.22 |
PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
---|---|---|---|---|---|
3qts | X46 | Cyclin-dependent kinase 2 | 2.7.11.22 | 1.000 | |
3r9n | Z68 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.621 | |
3rpr | 25Z | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.599 | |
3rah | O1Z | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.562 | |
2c6i | DT1 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.557 | |
3qtr | X36 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.546 | |
3r8v | Z62 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.539 | |
3r9d | X6B | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.525 | |
4kd1 | 1QK | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.525 | |
1w8c | N69 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.523 | |
3r8p | Z46 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.515 | |
3qx2 | X63 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.514 | |
2c69 | CT8 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.510 | |
3rm7 | 19Z | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.505 | |
3r71 | X86 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.504 | |
3rak | 03Z | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.504 | |
2c6o | 4SP | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.499 | |
3rai | X85 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.499 | |
3s1h | 56Z | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.499 | |
3s2p | PMU | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.496 | |
1h0w | 207 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.495 | |
3qru | X19 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.494 | |
4fko | 20K | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.493 | |
2fvd | LIA | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.492 | |
2vts | LZC | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.491 | |
4acm | 7YG | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.490 | |
2vto | LZ8 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.488 | |
1g5s | I17 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.485 | |
2vtp | LZ9 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.484 | |
3r7y | Z04 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.484 | |
3r8u | Z31 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.484 | |
2r3f | SC8 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.482 | |
3pxy | JWS | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.480 | |
3s00 | Z60 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.480 | |
3qxp | X64 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.479 | |
5aaa | VGH | ALK tyrosine kinase receptor | 2.7.10.1 | 0.479 | |
2a0c | CK9 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.478 | |
3r8l | Z30 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.478 | |
3rpv | 26Z | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.478 | |
3igg | EFQ | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.477 | |
2r3i | SCF | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.476 | |
3rm6 | 18Z | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.476 | |
3lfs | A07 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.474 | |
2c68 | CT6 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.473 | |
3qzg | X67 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.473 | |
3r73 | X87 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.472 | |
4bgh | 3I6 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.472 | |
2r3k | SCQ | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.470 | |
3qwj | X6A | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.470 | |
1w0x | OLO | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.468 | |
2r3r | 6SC | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.468 | |
3ama | SKE | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.467 | |
3rk9 | 09Z | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.467 | |
4fkr | 45K | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.467 | |
3qqh | X0A | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.465 | |
1fvt | 106 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.464 | |
2r3q | 5SC | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.464 | |
3qzh | X69 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.464 | |
3unk | 0BY | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.464 | |
2btr | U73 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.463 | |
1di8 | DTQ | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.462 | |
1h1r | 6CP | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.462 | |
1oit | HDT | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.462 | |
2c6m | DT5 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.462 | |
4b8l | A0P | Aurora kinase B-A | 2.7.11.1 | 0.462 | |
1pxm | CK5 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.461 | |
2w1h | L0F | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.461 | |
1ke6 | LS2 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.460 | |
3qtx | X43 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.460 | |
3r1s | X73 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.460 | |
3rpo | 24Z | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.460 | |
1ke5 | LS1 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.458 | |
3qtu | X44 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.458 | |
3r7v | Z02 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.458 | |
3rjc | 06Z | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.458 | |
3roy | 22Z | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.458 | |
2b55 | D31 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.457 | |
2r3o | 2SC | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.456 | |
3r9h | Z67 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.456 | |
1ckp | PVB | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.455 | |
2i40 | BLZ | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.455 | |
3r1y | X76 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.455 | |
3rk5 | 07Z | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.455 | |
3rni | 21Z | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.455 | |
3ezv | EZV | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.454 | |
3sw7 | 19K | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.454 | |
4fx3 | 60K | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.454 | |
2xb7 | GUI | ALK tyrosine kinase receptor | 2.7.10.1 | 0.453 | |
3r7e | X88 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.452 | |
4fkq | 42K | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.452 | |
2uzo | C62 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.451 | |
3v5l | 0G1 | Tyrosine-protein kinase ITK/TSK | 2.7.10.2 | 0.451 | |
4kio | G5K | Tyrosine-protein kinase ITK/TSK | 2.7.10.2 | 0.451 | |
1v1k | 3FP | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.450 | |
5dt0 | SKE | Aurora kinase A | 2.7.11.1 | 0.450 | |
2r3m | SCX | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.449 | |
4e5y | NDP | GDP-L-fucose synthase | 1.1.1.271 | 0.449 | |
3amb | VX6 | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.448 | |
3qtz | X42 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.448 | |
3r28 | XA0 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.448 | |
3rkb | 12Z | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.448 | |
2vv9 | IM9 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.447 | |
3wbl | PDY | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.447 | |
3rk7 | 08Z | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.446 | |
3u4u | LNH | Casein kinase II subunit alpha | 2.7.11.1 | 0.446 | |
1h1s | 4SP | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.445 | |
3my5 | RFZ | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.445 | |
3ral | 04Z | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.445 | |
3unj | 0BX | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.445 | |
4qmp | DKI | Serine/threonine-protein kinase 24 | 2.7.11.1 | 0.445 | |
3py0 | SU9 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.444 | |
3r6x | X84 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.444 | |
4ek6 | 10K | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.444 | |
4fkp | LS5 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.444 | |
3pj8 | 404 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.443 | |
4lyn | 1YG | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.443 | |
2c6l | DT4 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.442 | |
2vu3 | LZE | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.442 | |
2wpa | 889 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.442 | |
3ddp | RC8 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.442 | |
3qwk | X62 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.442 | |
3qxo | X65 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.442 | |
3sw4 | 18K | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.442 | |
4gmy | 0X5 | Tyrosine-protein kinase JAK2 | / | 0.442 | |
4mf1 | 29Y | Tyrosine-protein kinase ITK/TSK | 2.7.10.2 | 0.442 | |
4mq1 | 2C3 | Dual specificity tyrosine-phosphorylation-regulated kinase 1A | 2.7.12.1 | 0.442 | |
1ke9 | LS5 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.441 | |
3rzb | 02Z | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.441 | |
3zew | STU | Ephrin type-B receptor 4 | 2.7.10.1 | 0.441 | |
2b54 | D05 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.440 | |
2c4g | 514 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.440 | |
3r83 | Z14 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.440 | |
3sqq | 99Z | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.440 | |
4eor | 4SP | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.440 |