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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3qsaTA7Anthranilate phosphoribosyltransferase

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3qsaTA7Anthranilate phosphoribosyltransferase/1.000
3r6c17NAnthranilate phosphoribosyltransferase/0.600
3qqs17CAnthranilate phosphoribosyltransferase/0.563
4giu636Anthranilate phosphoribosyltransferase/0.557
3r8814FAnthranilate phosphoribosyltransferase/0.530
3uu114BAnthranilate phosphoribosyltransferase/0.525
3qs817DAnthranilate phosphoribosyltransferase/0.494
4own5RGAnthranilate phosphoribosyltransferase/0.491
4gkm683Anthranilate phosphoribosyltransferase/0.463
3a1cACPProbable copper-exporting P-type ATPase A3.6.3.540.458
2ch6ADPN-acetyl-D-glucosamine kinase2.7.1.590.455
2ft9CHDFatty acid-binding protein 2, liver/0.450
2vouFAD2,6-dihydroxypyridine 3-monooxygenase1.14.13.100.449
4bfwZVWPantothenate kinase2.7.1.330.444
1xvaSAMGlycine N-methyltransferase2.1.1.200.443
2j07HDFDeoxyribodipyrimidine photo-lyase4.1.99.30.443
4ztvTA7Anthranilate phosphoribosyltransferase/0.443
4eagATP5'-AMP-activated protein kinase subunit gamma-1/0.442
2vbdV10Isopenicillin N synthase1.21.3.10.441
2ylrNAPPhenylacetone monooxygenase1.14.13.920.440