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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3qeoLLTDeoxycytidine kinase2.7.1.74

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3qeoLLTDeoxycytidine kinase2.7.1.741.000
3mjrAC2Deoxycytidine kinase2.7.1.740.509
2zi63D1Deoxycytidine kinase2.7.1.740.499
2zi53L1Deoxycytidine kinase2.7.1.740.476
4jlm1NNDeoxycytidine kinase2.7.1.740.475
3qen5BTDeoxycytidine kinase2.7.1.740.465
4jln18VDeoxycytidine kinase2.7.1.740.464