Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
3q0v | LL4 | HTH-type transcriptional regulator EthR |
PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
---|---|---|---|---|---|
3q0v | LL4 | HTH-type transcriptional regulator EthR | / | 1.000 | |
3sfi | 3SF | HTH-type transcriptional regulator EthR | / | 0.631 | |
3g1m | RF3 | HTH-type transcriptional regulator EthR | / | 0.629 | |
3o8g | O8G | HTH-type transcriptional regulator EthR | / | 0.628 | |
3q0u | LL3 | HTH-type transcriptional regulator EthR | / | 0.624 | |
3o8h | O8H | HTH-type transcriptional regulator EthR | / | 0.612 | |
3tp0 | FO5 | HTH-type transcriptional regulator EthR | / | 0.608 | |
4dw6 | 0MN | HTH-type transcriptional regulator EthR | / | 0.483 | |
3p6p | A6B | Camphor 5-monooxygenase | 1.14.15.1 | 0.461 | |
3iup | NDP | Possible NADH oxidoreductase | / | 0.455 | |
3g1o | RF1 | HTH-type transcriptional regulator EthR | / | 0.450 | |
3ant | S82 | Bifunctional epoxide hydrolase 2 | 3.3.2.10 | 0.448 | |
2q9f | C3S | Cholesterol 24-hydroxylase | / | 0.447 | |
3g1l | RF2 | HTH-type transcriptional regulator EthR | / | 0.447 | |
4at0 | FAD | Possible succinate dehydrogenase | / | 0.445 |