scPDB - Distribution of Binding site Similarity values of 3pnf entry / Site 1

Distribution of Binding site similarity measured by Shaper

You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
3pnf	H4B	Nitric oxide synthase, brain	1.14.13.39

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
3pnf	H4B	Nitric oxide synthase, brain	1.14.13.39	1.000
3rqj	H4B	Nitric oxide synthase, brain	1.14.13.39	0.908
3nlz	H4B	Nitric oxide synthase, brain	1.14.13.39	0.906
1p6j	H4B	Nitric oxide synthase, brain	1.14.13.39	0.850
3b3p	H4B	Nitric oxide synthase, brain	1.14.13.39	0.803
3jt7	H4B	Nitric oxide synthase, brain	1.14.13.39	0.798
1p6k	H4B	Nitric oxide synthase, brain	1.14.13.39	0.796
4fw0	H4B	Nitric oxide synthase, brain	1.14.13.39	0.788
3ufu	H4B	Nitric oxide synthase, brain	1.14.13.39	0.771
3jwt	H4B	Nitric oxide synthase, brain	1.14.13.39	0.767
3b3n	H4B	Nitric oxide synthase, brain	1.14.13.39	0.759
1rs6	H4B	Nitric oxide synthase, brain	1.14.13.39	0.753
1rs7	H4B	Nitric oxide synthase, brain	1.14.13.39	0.737
2hx4	H4B	Nitric oxide synthase, brain	1.14.13.39	0.737
4cx3	H4B	Nitric oxide synthase, brain	1.14.13.39	0.737
2g6i	HBI	Nitric oxide synthase, brain	1.14.13.39	0.734
4lux	H4B	Nitric oxide synthase, brain	1.14.13.39	0.730
4fvx	H4B	Nitric oxide synthase, brain	1.14.13.39	0.726
4imt	H4B	Nitric oxide synthase, brain	1.14.13.39	0.720
3b3o	H4B	Nitric oxide synthase, brain	1.14.13.39	0.718
1m00	H4B	Nitric oxide synthase, brain	1.14.13.39	0.710
3jwv	H4B	Nitric oxide synthase, brain	1.14.13.39	0.708
1mmv	H4B	Nitric oxide synthase, brain	1.14.13.39	0.702
3n5y	H4B	Nitric oxide synthase, brain	1.14.13.39	0.702
3b3m	H4B	Nitric oxide synthase, brain	1.14.13.39	0.699
1zzr	H4B	Nitric oxide synthase, brain	1.14.13.39	0.698
4jsi	H4B	Nitric oxide synthase, brain	1.14.13.39	0.696
4jsg	H4B	Nitric oxide synthase, brain	1.14.13.39	0.692
3rqm	H4B	Nitric oxide synthase, brain	1.14.13.39	0.690
3jt5	H4B	Nitric oxide synthase, brain	1.14.13.39	0.687
3ufq	H4B	Nitric oxide synthase, brain	1.14.13.39	0.682
3fc5	H4B	Nitric oxide synthase, brain	1.14.13.39	0.677
4fvy	H4B	Nitric oxide synthase, brain	1.14.13.39	0.676
1zzq	H4B	Nitric oxide synthase, brain	1.14.13.39	0.675
3nnz	H4B	Nitric oxide synthase, brain	1.14.13.39	0.669
4eux	H4B	Nitric oxide synthase, brain	1.14.13.39	0.669
3ufr	H4B	Nitric oxide synthase, brain	1.14.13.39	0.661
4fvz	H4B	Nitric oxide synthase, brain	1.14.13.39	0.660
1k2u	H4B	Nitric oxide synthase, brain	1.14.13.39	0.657
3n5z	H4B	Nitric oxide synthase, brain	1.14.13.39	0.656
1k2t	H4B	Nitric oxide synthase, brain	1.14.13.39	0.655
3png	H4B	Nitric oxide synthase, brain	1.14.13.39	0.655
3nlw	H4B	Nitric oxide synthase, brain	1.14.13.39	0.654
3tyl	H4B	Nitric oxide synthase, brain	1.14.13.39	0.654
4jsf	H4B	Nitric oxide synthase, brain	1.14.13.39	0.653
4imw	H4B	Nitric oxide synthase, brain	1.14.13.39	0.648
3jt9	H4B	Nitric oxide synthase, brain	1.14.13.39	0.647
3svq	H4B	Nitric oxide synthase, brain	1.14.13.39	0.644
3jwu	H4B	Nitric oxide synthase, brain	1.14.13.39	0.642
5agl	H4B	Nitric oxide synthase, brain	1.14.13.39	0.640
3ufv	H4B	Nitric oxide synthase, brain	1.14.13.39	0.639
3dqr	H4B	Nitric oxide synthase, brain	1.14.13.39	0.637
3pne	H4B	Nitric oxide synthase, brain	1.14.13.39	0.637
4k5g	H4B	Nitric oxide synthase, brain	1.14.13.39	0.637
1k2s	H4B	Nitric oxide synthase, brain	1.14.13.39	0.636
3ufw	H4B	Nitric oxide synthase, brain	1.14.13.39	0.636
3q9a	H4B	Nitric oxide synthase, brain	1.14.13.39	0.635
3rqk	H4B	Nitric oxide synthase, brain	1.14.13.39	0.635
3nny	H4B	Nitric oxide synthase, brain	1.14.13.39	0.634
3tym	H4B	Nitric oxide synthase, brain	1.14.13.39	0.634
3ufo	H4B	Nitric oxide synthase, brain	1.14.13.39	0.634
3nlj	H4B	Nitric oxide synthase, brain	1.14.13.39	0.633
4k5d	H4B	Nitric oxide synthase, brain	1.14.13.39	0.633
3nlk	H4B	Nitric oxide synthase, brain	1.14.13.39	0.632
3nlo	H4B	Nitric oxide synthase, brain	1.14.13.39	0.631
4gqe	H4B	Nitric oxide synthase, brain	1.14.13.39	0.629
3jx2	H4B	Nitric oxide synthase, brain	1.14.13.39	0.628
3jx5	H4B	Nitric oxide synthase, brain	1.14.13.39	0.628
5agp	H4B	Nitric oxide synthase, brain	1.14.13.39	0.628
3svp	H4B	Nitric oxide synthase, brain	1.14.13.39	0.627
4cx5	H4B	Nitric oxide synthase, brain	1.14.13.39	0.627
4k5e	H4B	Nitric oxide synthase, brain	1.14.13.39	0.627
4jsh	H4B	Nitric oxide synthase, brain	1.14.13.39	0.624
2hx3	H4B	Nitric oxide synthase, brain	1.14.13.39	0.619
3jta	H4B	Nitric oxide synthase, brain	1.14.13.39	0.614
1zzu	H4B	Nitric oxide synthase, brain	1.14.13.39	0.613
3nlp	H4B	Nitric oxide synthase, brain	1.14.13.39	0.613
3rql	H4B	Nitric oxide synthase, brain	1.14.13.39	0.612
4k5f	H4B	Nitric oxide synthase, brain	1.14.13.39	0.609
3nlv	H4B	Nitric oxide synthase, brain	1.14.13.39	0.608
3hsn	H4B	Nitric oxide synthase, brain	1.14.13.39	0.607
5agk	H4B	Nitric oxide synthase, brain	1.14.13.39	0.607
3e7g	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.606
3q99	H4B	Nitric oxide synthase, brain	1.14.13.39	0.605
3ufp	H4B	Nitric oxide synthase, brain	1.14.13.39	0.605
2g6j	7AP	Nitric oxide synthase, brain	1.14.13.39	0.602
3nln	H4B	Nitric oxide synthase, brain	1.14.13.39	0.602
3jt8	H4B	Nitric oxide synthase, brain	1.14.13.39	0.601
3ufs	H4B	Nitric oxide synthase, brain	1.14.13.39	0.600
3jx6	H4B	Nitric oxide synthase, brain	1.14.13.39	0.599
3nly	H4B	Nitric oxide synthase, brain	1.14.13.39	0.599
3ej8	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.597
3nlr	H4B	Nitric oxide synthase, brain	1.14.13.39	0.595
3jt3	H4B	Nitric oxide synthase, brain	1.14.13.39	0.594
4cx4	H4B	Nitric oxide synthase, brain	1.14.13.39	0.593
3nlq	H4B	Nitric oxide synthase, brain	1.14.13.39	0.590
3jt6	H4B	Nitric oxide synthase, brain	1.14.13.39	0.588
3n5v	H4B	Nitric oxide synthase, brain	1.14.13.39	0.588
3jt4	H4B	Nitric oxide synthase, brain	1.14.13.39	0.584
1om5	H4B	Nitric oxide synthase, brain	1.14.13.39	0.583
3e6t	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.581
3uft	H4B	Nitric oxide synthase, brain	1.14.13.39	0.578
3jx3	H4B	Nitric oxide synthase, brain	1.14.13.39	0.577
3dwj	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.569
2nod	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.567
3nos	H4B	Nitric oxide synthase, endothelial	1.14.13.39	0.566
1r35	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.564
1zvl	H4B	Nitric oxide synthase, brain	1.14.13.39	0.563
3jx4	H4B	Nitric oxide synthase, brain	1.14.13.39	0.563
3nw2	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.557
3e6o	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.556
4d1o	H4B	Nitric oxide synthase, endothelial	1.14.13.39	0.552
4imu	H4B	Nitric oxide synthase, brain	1.14.13.39	0.537
3nod	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.529
1vaf	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.526
1m8e	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.525
4jse	H4B	Nitric oxide synthase, brain	1.14.13.39	0.522
1dwx	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.515
3e67	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.512
3n61	H4B	Nitric oxide synthase, brain	1.14.13.39	0.510
1qom	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.495
1m9t	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.485
1m8i	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.459
3n60	XFN	Nitric oxide synthase, brain	1.14.13.39	0.458
3n66	XFN	Nitric oxide synthase, brain	1.14.13.39	0.452
1m8d	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.445