Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 3ou6 | SAM | SAM-dependent methyltransferase |
| PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
|---|---|---|---|---|---|
| 3ou6 | SAM | SAM-dependent methyltransferase | / | 1.000 | |
| 3ou7 | SAM | SAM-dependent methyltransferase | / | 0.627 | |
| 3ou2 | SAH | SAM-dependent methyltransferase | / | 0.511 | |
| 1o6r | R19 | Squalene--hopene cyclase | 4.2.1.129 | 0.446 | |
| 1x1b | SAH | C-20 methyltransferase | / | 0.442 | |
| 3e23 | SAM | Uncharacterized protein | / | 0.442 |