scPDB - Distribution of Binding site Similarity values of 3nbz entry / Site 2

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
3nbz	GTP	GTP-binding nuclear protein Ran

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
3nbz	GTP	GTP-binding nuclear protein Ran	/	1.000
2x19	GTP	GTP-binding nuclear protein GSP1/CNR1	/	0.557
4ol0	GTP	GTP-binding nuclear protein Ran	/	0.507
4k81	GTP	GTPase HRas	/	0.505
3w3z	GTP	GTP-binding nuclear protein Ran	/	0.474
5dha	GNP	GTP-binding nuclear protein Ran	/	0.454
2gil	GTP	Ras-related protein Rab-6A	/	0.451
4xoi	GTP	Transforming protein RhoA	/	0.447
3e5h	GNP	Ras-related protein Rab-28	/	0.444
3wyg	GTP	GTP-binding nuclear protein GSP1/CNR1	/	0.440