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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3n60XFNNitric oxide synthase, brain1.14.13.39

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3n60XFNNitric oxide synthase, brain1.14.13.391.000
3n66XFNNitric oxide synthase, brain1.14.13.390.708
3n63XFNNitric oxide synthase, brain1.14.13.390.687
3n65XFJNitric oxide synthase, brain1.14.13.390.541
3n5wXFJNitric oxide synthase, brain1.14.13.390.532
3jx3JI5Nitric oxide synthase, brain1.14.13.390.530
3n5xXFKNitric oxide synthase, brain1.14.13.390.530
4imu1ETNitric oxide synthase, brain1.14.13.390.527
3n62XFJNitric oxide synthase, brain1.14.13.390.521
3svqJK4Nitric oxide synthase, brain1.14.13.390.504
3n61XFJNitric oxide synthase, brain1.14.13.390.495
3ufwHW0Nitric oxide synthase, brain1.14.13.390.489
3nny59RNitric oxide synthase, brain1.14.13.390.484
4k5fQ14Nitric oxide synthase, brain1.14.13.390.484
3n5yXFLNitric oxide synthase, brain1.14.13.390.480
4jshQ15Nitric oxide synthase, brain1.14.13.390.471
4cx4HW9Nitric oxide synthase, brain1.14.13.390.470
3nloJSRNitric oxide synthase, brain1.14.13.390.468
1p6jDP9Nitric oxide synthase, brain1.14.13.390.467
3nnz59WNitric oxide synthase, brain1.14.13.390.466
1zzrDP9Nitric oxide synthase, brain1.14.13.390.463
3b3oJI3Nitric oxide synthase, brain1.14.13.390.462
2hx44HXNitric oxide synthase, brain1.14.13.390.461
3ufqHW5Nitric oxide synthase, brain1.14.13.390.460
4euxHW1Nitric oxide synthase, brain1.14.13.390.459
4lwaQ13Nitric oxide synthase oxygenase1.14.13.1650.459
3tym08RNitric oxide synthase, brain1.14.13.390.457
3b3pJI7Nitric oxide synthase, brain1.14.13.390.451
3nlw3XFNitric oxide synthase, brain1.14.13.390.450
3tylAXWNitric oxide synthase, brain1.14.13.390.446
3pnf8BXNitric oxide synthase, brain1.14.13.390.445
4cx5HW8Nitric oxide synthase, brain1.14.13.390.445
3nlpJSSNitric oxide synthase, brain1.14.13.390.444
3pne8AXNitric oxide synthase, brain1.14.13.390.443
3rqjY2BNitric oxide synthase, brain1.14.13.390.443
3rqkX2CNitric oxide synthase, brain1.14.13.390.443
4k5d1Q6Nitric oxide synthase, brain1.14.13.390.443
1zzqDP9Nitric oxide synthase, brain1.14.13.390.442
3jx5J14Nitric oxide synthase, brain1.14.13.390.442
3nlqJRRNitric oxide synthase, brain1.14.13.390.442
3ufrH5WNitric oxide synthase, brain1.14.13.390.442
1zzuDP1Nitric oxide synthase, brain1.14.13.390.441
3nlv3XANitric oxide synthase, brain1.14.13.390.441
3jx4J11Nitric oxide synthase, brain1.14.13.390.440
3png8CXNitric oxide synthase, brain1.14.13.390.440
4k5e1Q7Nitric oxide synthase, brain1.14.13.390.440