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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3mvhWFERAC-alpha serine/threonine-protein kinase2.7.11.1

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3mvhWFERAC-alpha serine/threonine-protein kinase2.7.11.11.000
4gv10XZRAC-alpha serine/threonine-protein kinase2.7.11.10.600
4ekl0RFRAC-alpha serine/threonine-protein kinase2.7.11.10.529
4l455FIRibosomal protein S6 kinase beta-12.7.11.10.492
3zo4QWIcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.486
4otiMI1Serine/threonine-protein kinase N1/0.486
2vo0M03cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.479
2vo3M04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.478
1bx6BA1cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.470
2vo7M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.469
3e8eG98cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.467
4l435FIRibosomal protein S6 kinase beta-12.7.11.10.458
2uzuL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.457
4ekkANPRAC-alpha serine/threonine-protein kinase2.7.11.10.456
2jdtI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.455
4l445FIRibosomal protein S6 kinase beta-12.7.11.10.455
2oh02PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.454
2uzvSS5cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.453
1q8wM77cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.451
3dqwAGSProto-oncogene tyrosine-protein kinase Src2.7.10.20.446
3kkvB99cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.446
2uw0GVKcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.442
2c1aI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.441
3cqwCQWRAC-alpha serine/threonine-protein kinase2.7.11.10.441
4axaRKDcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.441
2jdsL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.440