Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
3m2t | NAD | Probable dehydrogenase |
PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
---|---|---|---|---|---|
3m2t | NAD | Probable dehydrogenase | / | 1.000 | |
2jn3 | JN3 | Fatty acid-binding protein, liver | / | 0.491 | |
2cf6 | NAP | Cinnamyl alcohol dehydrogenase 5 | 1.1.1.195 | 0.470 | |
2ges | COK | Pantothenate kinase | 2.7.1.33 | 0.457 | |
3ec7 | NAD | Inositol 2-dehydrogenase | / | 0.448 | |
2geu | COK | Pantothenate kinase | 2.7.1.33 | 0.440 |