Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3ln1CELProstaglandin G/H synthase 21.14.99.1

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3ln1CELProstaglandin G/H synthase 21.14.99.11.000
3ntgD72Prostaglandin G/H synthase 21.14.99.10.610
6coxS58Prostaglandin G/H synthase 21.14.99.10.585
2oyuIMSProstaglandin G/H synthase 11.14.99.10.584
4fm5DF0Prostaglandin G/H synthase 21.14.99.10.584
4coxIMNProstaglandin G/H synthase 21.14.99.10.582
2oyeIM8Prostaglandin G/H synthase 11.14.99.10.557
3rr3FLRProstaglandin G/H synthase 21.14.99.10.550
3mqe416Prostaglandin G/H synthase 21.14.99.10.547
3kk6CELProstaglandin G/H synthase 11.14.99.10.544
4rrxLURProstaglandin G/H synthase 21.14.99.10.527
4ph9IBPProstaglandin G/H synthase 21.14.99.10.522
1cx2S58Prostaglandin G/H synthase 21.14.99.10.521
5ikrID8Prostaglandin G/H synthase 21.14.99.10.490
4rrwLURProstaglandin G/H synthase 21.14.99.10.489
4rrzLURProstaglandin G/H synthase 21.14.99.10.489
3q7dNPXProstaglandin G/H synthase 21.14.99.10.483
1eqhFLPProstaglandin G/H synthase 11.14.99.10.481
1eqgIBPProstaglandin G/H synthase 11.14.99.10.476
3n8wFLPProstaglandin G/H synthase 11.14.99.10.475
5ikqJMSProstaglandin G/H synthase 21.14.99.10.474
1q4gBFLProstaglandin G/H synthase 11.14.99.10.467
3pghFLPProstaglandin G/H synthase 21.14.99.10.467
4otyLURProstaglandin G/H synthase 21.14.99.10.467
1ht834CProstaglandin G/H synthase 11.14.99.10.463
3n8xNIMProstaglandin G/H synthase 11.14.99.10.457
1pxxDIFProstaglandin G/H synthase 21.14.99.10.452
3n8zFLPProstaglandin G/H synthase 11.14.99.10.444
2aylFLPProstaglandin G/H synthase 11.14.99.10.440