scPDB - Distribution of Binding site Similarity values of 3lhd entry / Site 3

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
3lhd	SAH	tRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase TrmI	2.1.1.219

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity	Align
3lhd	SAH	tRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase TrmI	2.1.1.219	1.000
3lga	SAH	tRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase TrmI	2.1.1.219	0.453