scPDB - Distribution of Binding site Similarity values of 3ka7 entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
3ka7	FAD	Putative oxidoreductase

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
3ka7	FAD	Putative oxidoreductase	/	1.000
2v3a	FAD	Rubredoxin-NAD(+) reductase	1.18.1.1	0.449
2c3d	FAD	2-oxopropyl-CoM reductase, carboxylating	1.8.1.5	0.444
1mo9	FAD	2-oxopropyl-CoM reductase, carboxylating	1.8.1.5	0.443
5g3t	FDA	Flavin-dependent L-tryptophan oxidase VioA	/	0.442