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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3jt9H4BNitric oxide synthase, brain1.14.13.39

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
3jt9H4BNitric oxide synthase, brain1.14.13.391.000
3jt5H4BNitric oxide synthase, brain1.14.13.390.886
3jt8H4BNitric oxide synthase, brain1.14.13.390.810
3nnzH4BNitric oxide synthase, brain1.14.13.390.741
1k2sH4BNitric oxide synthase, brain1.14.13.390.724
3jt7H4BNitric oxide synthase, brain1.14.13.390.717
3b3oH4BNitric oxide synthase, brain1.14.13.390.709
2g6iHBINitric oxide synthase, brain1.14.13.390.698
3fc5H4BNitric oxide synthase, brain1.14.13.390.694
3jwvH4BNitric oxide synthase, brain1.14.13.390.690
1zzrH4BNitric oxide synthase, brain1.14.13.390.687
4fvyH4BNitric oxide synthase, brain1.14.13.390.684
4luxH4BNitric oxide synthase, brain1.14.13.390.677
3hsnH4BNitric oxide synthase, brain1.14.13.390.673
3q9aH4BNitric oxide synthase, brain1.14.13.390.671
4fvzH4BNitric oxide synthase, brain1.14.13.390.664
3jwtH4BNitric oxide synthase, brain1.14.13.390.655
4fvxH4BNitric oxide synthase, brain1.14.13.390.654
2g6j7APNitric oxide synthase, brain1.14.13.390.651
3jtaH4BNitric oxide synthase, brain1.14.13.390.640
2hx4H4BNitric oxide synthase, brain1.14.13.390.638
3nlzH4BNitric oxide synthase, brain1.14.13.390.636
3tylH4BNitric oxide synthase, brain1.14.13.390.636
3rqjH4BNitric oxide synthase, brain1.14.13.390.635
1k2uH4BNitric oxide synthase, brain1.14.13.390.634
1zzqH4BNitric oxide synthase, brain1.14.13.390.624
3jt6H4BNitric oxide synthase, brain1.14.13.390.624
3n5yH4BNitric oxide synthase, brain1.14.13.390.624
4jshH4BNitric oxide synthase, brain1.14.13.390.624
3n5vH4BNitric oxide synthase, brain1.14.13.390.621
3q99H4BNitric oxide synthase, brain1.14.13.390.621
3ufqH4BNitric oxide synthase, brain1.14.13.390.621
1p6kH4BNitric oxide synthase, brain1.14.13.390.616
3jx4H4BNitric oxide synthase, brain1.14.13.390.616
3pnfH4BNitric oxide synthase, brain1.14.13.390.616
5agpH4BNitric oxide synthase, brain1.14.13.390.614
3n5zH4BNitric oxide synthase, brain1.14.13.390.610
4fw0H4BNitric oxide synthase, brain1.14.13.390.610
4euxH4BNitric oxide synthase, brain1.14.13.390.609
3jt3H4BNitric oxide synthase, brain1.14.13.390.607
3svqH4BNitric oxide synthase, brain1.14.13.390.606
3dqrH4BNitric oxide synthase, brain1.14.13.390.604
4jsfH4BNitric oxide synthase, brain1.14.13.390.603
5agkH4BNitric oxide synthase, brain1.14.13.390.603
3ufvH4BNitric oxide synthase, brain1.14.13.390.601
4jsgH4BNitric oxide synthase, brain1.14.13.390.600
3b3nH4BNitric oxide synthase, brain1.14.13.390.599
4k5gH4BNitric oxide synthase, brain1.14.13.390.599
1zvlH4BNitric oxide synthase, brain1.14.13.390.597
3rqkH4BNitric oxide synthase, brain1.14.13.390.597
3jwuH4BNitric oxide synthase, brain1.14.13.390.594
3nosH4BNitric oxide synthase, endothelial1.14.13.390.594
3tymH4BNitric oxide synthase, brain1.14.13.390.594
1k2tH4BNitric oxide synthase, brain1.14.13.390.593
3nlwH4BNitric oxide synthase, brain1.14.13.390.593
3ufwH4BNitric oxide synthase, brain1.14.13.390.592
4jsiH4BNitric oxide synthase, brain1.14.13.390.592
5aglH4BNitric oxide synthase, brain1.14.13.390.592
1mmvH4BNitric oxide synthase, brain1.14.13.390.589
1p6jH4BNitric oxide synthase, brain1.14.13.390.589
3svpH4BNitric oxide synthase, brain1.14.13.390.586
3jx3H4BNitric oxide synthase, brain1.14.13.390.585
4k5eH4BNitric oxide synthase, brain1.14.13.390.585
1om5H4BNitric oxide synthase, brain1.14.13.390.584
4k5dH4BNitric oxide synthase, brain1.14.13.390.584
1rs7H4BNitric oxide synthase, brain1.14.13.390.583
1zzuH4BNitric oxide synthase, brain1.14.13.390.583
2hx3H4BNitric oxide synthase, brain1.14.13.390.583
3jt4H4BNitric oxide synthase, brain1.14.13.390.583
3jx2H4BNitric oxide synthase, brain1.14.13.390.583
3nlpH4BNitric oxide synthase, brain1.14.13.390.583
4gqeH4BNitric oxide synthase, brain1.14.13.390.582
3nloH4BNitric oxide synthase, brain1.14.13.390.580
3ufpH4BNitric oxide synthase, brain1.14.13.390.580
3nlrH4BNitric oxide synthase, brain1.14.13.390.579
3nnyH4BNitric oxide synthase, brain1.14.13.390.579
3pneH4BNitric oxide synthase, brain1.14.13.390.579
4imtH4BNitric oxide synthase, brain1.14.13.390.577
3nlnH4BNitric oxide synthase, brain1.14.13.390.572
3jx5H4BNitric oxide synthase, brain1.14.13.390.569
4cx4H4BNitric oxide synthase, brain1.14.13.390.568
3ufsH4BNitric oxide synthase, brain1.14.13.390.565
3ufuH4BNitric oxide synthase, brain1.14.13.390.564
4cx3H4BNitric oxide synthase, brain1.14.13.390.564
3nlqH4BNitric oxide synthase, brain1.14.13.390.563
3ufoH4BNitric oxide synthase, brain1.14.13.390.563
3ej8H4BNitric oxide synthase, inducible1.14.13.390.562
3e7gH4BNitric oxide synthase, inducible1.14.13.390.560
3ufrH4BNitric oxide synthase, brain1.14.13.390.560
4cx5H4BNitric oxide synthase, brain1.14.13.390.560
3pngH4BNitric oxide synthase, brain1.14.13.390.559
3nlkH4BNitric oxide synthase, brain1.14.13.390.557
4k5fH4BNitric oxide synthase, brain1.14.13.390.554
3jx6H4BNitric oxide synthase, brain1.14.13.390.552
3rqlH4BNitric oxide synthase, brain1.14.13.390.551
4d1oH4BNitric oxide synthase, endothelial1.14.13.390.549
1dwxH4BNitric oxide synthase, inducible1.14.13.390.548
3nodH4BNitric oxide synthase, inducible1.14.13.390.548
3uftH4BNitric oxide synthase, brain1.14.13.390.545
3b3pH4BNitric oxide synthase, brain1.14.13.390.543
2nodH4BNitric oxide synthase, inducible1.14.13.390.535
3e6oH4BNitric oxide synthase, inducible1.14.13.390.535
3rqmH4BNitric oxide synthase, brain1.14.13.390.533
1m00H4BNitric oxide synthase, brain1.14.13.390.532
3e6tH4BNitric oxide synthase, inducible1.14.13.390.532
4imwH4BNitric oxide synthase, brain1.14.13.390.531
1r35H4BNitric oxide synthase, inducible1.14.13.390.526
3dwjH4BNitric oxide synthase, inducible1.14.13.390.509
3nlyH4BNitric oxide synthase, brain1.14.13.390.507
1m8eH4BNitric oxide synthase, inducible1.14.13.390.503
3nw2H4BNitric oxide synthase, inducible1.14.13.390.495
4imuH4BNitric oxide synthase, brain1.14.13.390.494
3nlvH4BNitric oxide synthase, brain1.14.13.390.489
1vafH4BNitric oxide synthase, inducible1.14.13.390.487
1rs6H4BNitric oxide synthase, brain1.14.13.390.486
3nljH4BNitric oxide synthase, brain1.14.13.390.473
3e67H4BNitric oxide synthase, inducible1.14.13.390.470
4jseH4BNitric oxide synthase, brain1.14.13.390.469
3n61H4BNitric oxide synthase, brain1.14.13.390.468
3b3mH4BNitric oxide synthase, brain1.14.13.390.460
1m9tH4BNitric oxide synthase, inducible1.14.13.390.449
1qomH4BNitric oxide synthase, inducible1.14.13.390.449
1qw5H4BNitric oxide synthase, inducible1.14.13.390.446