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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3ig7EFPCyclin-dependent kinase 22.7.11.22

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3ig7EFPCyclin-dependent kinase 22.7.11.221.000
2w06FRVCyclin-dependent kinase 22.7.11.220.605
2r3kSCQCyclin-dependent kinase 22.7.11.220.582
3lfnA27Cyclin-dependent kinase 22.7.11.220.564
2b55D31Cyclin-dependent kinase 22.7.11.220.559
2vtpLZ9Cyclin-dependent kinase 22.7.11.220.553
3sqq99ZCyclin-dependent kinase 22.7.11.220.553
3r9hZ67Cyclin-dependent kinase 22.7.11.220.552
2r3lSCWCyclin-dependent kinase 22.7.11.220.546
3qxoX65Cyclin-dependent kinase 22.7.11.220.542
3rjc06ZCyclin-dependent kinase 22.7.11.220.541
3iggEFQCyclin-dependent kinase 22.7.11.220.540
3r9dX6BCyclin-dependent kinase 22.7.11.220.538
2vu3LZECyclin-dependent kinase 22.7.11.220.535
3roy22ZCyclin-dependent kinase 22.7.11.220.532
1v1k3FPCyclin-dependent kinase 22.7.11.220.531
3qxpX64Cyclin-dependent kinase 22.7.11.220.531
3rm719ZCyclin-dependent kinase 22.7.11.220.530
3qtrX36Cyclin-dependent kinase 22.7.11.220.529
1pxmCK5Cyclin-dependent kinase 22.7.11.220.528
2j9mPY8Cyclin-dependent kinase 22.7.11.220.528
2r3p3SCCyclin-dependent kinase 22.7.11.220.527
3rni21ZCyclin-dependent kinase 22.7.11.220.527
3rk909ZCyclin-dependent kinase 22.7.11.220.526
3r83Z14Cyclin-dependent kinase 22.7.11.220.524
4fkj11KCyclin-dependent kinase 22.7.11.220.524
3qwjX6ACyclin-dependent kinase 22.7.11.220.522
1w0xOLOCyclin-dependent kinase 22.7.11.220.521
3wblPDYCyclin-dependent kinase 22.7.11.220.521
2w1hL0FCyclin-dependent kinase 22.7.11.220.520
3qu0X40Cyclin-dependent kinase 22.7.11.220.520
3qzhX69Cyclin-dependent kinase 22.7.11.220.520
3r1sX73Cyclin-dependent kinase 22.7.11.220.520
3ral04ZCyclin-dependent kinase 22.7.11.220.520
1ke6LS2Cyclin-dependent kinase 22.7.11.220.518
2a0cCK9Cyclin-dependent kinase 22.7.11.220.518
3s0o50ZCyclin-dependent kinase 22.7.11.220.517
3qqfX07Cyclin-dependent kinase 22.7.11.220.516
1fvt106Cyclin-dependent kinase 22.7.11.220.515
1ke7LS3Cyclin-dependent kinase 22.7.11.220.514
3raiX85Cyclin-dependent kinase 22.7.11.220.514
3s2pPMUCyclin-dependent kinase 22.7.11.220.514
1gih1PUCyclin-dependent kinase 22.7.11.220.513
4bgh3I6Cyclin-dependent kinase 22.7.11.220.513
2c6o4SPCyclin-dependent kinase 22.7.11.220.512
1h1r6CPCyclin-dependent kinase 22.7.11.220.511
3r7yZ04Cyclin-dependent kinase 22.7.11.220.511
4fkr45KCyclin-dependent kinase 22.7.11.220.511
3r73X87Cyclin-dependent kinase 22.7.11.220.510
3rak03ZCyclin-dependent kinase 22.7.11.220.510
1ke5LS1Cyclin-dependent kinase 22.7.11.220.509
3ezvEZVCyclin-dependent kinase 22.7.11.220.509
3rm618ZCyclin-dependent kinase 22.7.11.220.509
3qqkX02Cyclin-dependent kinase 22.7.11.220.508
3r7iX9ICyclin-dependent kinase 22.7.11.220.507
3rk507ZCyclin-dependent kinase 22.7.11.220.507
3rk708ZCyclin-dependent kinase 22.7.11.220.507
2a4lRRCCyclin-dependent kinase 22.7.11.220.506
2vtoLZ8Cyclin-dependent kinase 22.7.11.220.506
3qtuX44Cyclin-dependent kinase 22.7.11.220.506
3qtzX42Cyclin-dependent kinase 22.7.11.220.506
3r1qX75Cyclin-dependent kinase 22.7.11.220.505
3r71X86Cyclin-dependent kinase 22.7.11.220.504
1ke9LS5Cyclin-dependent kinase 22.7.11.220.503
2btsU32Cyclin-dependent kinase 22.7.11.220.503
3rkb12ZCyclin-dependent kinase 22.7.11.220.503
3unk0BYCyclin-dependent kinase 22.7.11.220.503
3r28XA0Cyclin-dependent kinase 22.7.11.220.502
3r6xX84Cyclin-dependent kinase 22.7.11.220.502
3rpv26ZCyclin-dependent kinase 22.7.11.220.501
3sw719KCyclin-dependent kinase 22.7.11.220.501
1y91CT9Cyclin-dependent kinase 22.7.11.220.500
2r3mSCXCyclin-dependent kinase 22.7.11.220.500
3qruX19Cyclin-dependent kinase 22.7.11.220.500
1oguST8Cyclin-dependent kinase 22.7.11.220.499
3qtxX43Cyclin-dependent kinase 22.7.11.220.499
4bcmT7ZCyclin-dependent kinase 22.7.11.220.499
2r64740Cyclin-dependent kinase 22.7.11.220.498
3sw418KCyclin-dependent kinase 22.7.11.220.498
4fki09KCyclin-dependent kinase 22.7.11.220.498
4fkq42KCyclin-dependent kinase 22.7.11.220.498
1oiyN41Cyclin-dependent kinase 22.7.11.220.497
1vyw292Cyclin-dependent kinase 22.7.11.220.497
2uzoC62Cyclin-dependent kinase 22.7.11.220.497
3qzgX67Cyclin-dependent kinase 22.7.11.220.497
2iw84SPCyclin-dependent kinase 22.7.11.220.496
3unj0BXCyclin-dependent kinase 22.7.11.220.496
1ke8LS4Cyclin-dependent kinase 22.7.11.220.495
1urwI1PCyclin-dependent kinase 22.7.11.220.495
4fkpLS5Cyclin-dependent kinase 22.7.11.220.495
4fx360KCyclin-dependent kinase 22.7.11.220.495
3qx2X63Cyclin-dependent kinase 22.7.11.220.494
1h1s4SPCyclin-dependent kinase 22.7.11.220.493
4bcpT3CCyclin-dependent kinase 22.7.11.220.493
1g5sI17Cyclin-dependent kinase 22.7.11.220.492
1w8cN69Cyclin-dependent kinase 22.7.11.220.492
3ezrEZRCyclin-dependent kinase 22.7.11.220.492
4fkw62KCyclin-dependent kinase 22.7.11.220.492
2w05FRTCyclin-dependent kinase 22.7.11.220.491
3rmf20ZCyclin-dependent kinase 22.7.11.220.490
3qwkX62Cyclin-dependent kinase 22.7.11.220.489
1ckpPVBCyclin-dependent kinase 22.7.11.220.488
2r3r6SCCyclin-dependent kinase 22.7.11.220.488
3ddpRC8Cyclin-dependent kinase 22.7.11.220.488
3r8lZ30Cyclin-dependent kinase 22.7.11.220.488
1oitHDTCyclin-dependent kinase 22.7.11.220.487
2vtnLZ7Cyclin-dependent kinase 22.7.11.220.487
3ddqRRCCyclin-dependent kinase 22.7.11.220.487
3s1h56ZCyclin-dependent kinase 22.7.11.220.487
4fkv61KCyclin-dependent kinase 22.7.11.220.487
1ykr628Cyclin-dependent kinase 22.7.11.220.486
3qtwX3ACyclin-dependent kinase 22.7.11.220.486
1oi9N20Cyclin-dependent kinase 22.7.11.220.485
2xmyCDKCyclin-dependent kinase 22.7.11.220.485
3rpo24ZCyclin-dependent kinase 22.7.11.220.485
2vtiLZ3Cyclin-dependent kinase 22.7.11.220.483
4erwSTUCyclin-dependent kinase 22.7.11.220.483
1p2a5BNCyclin-dependent kinase 22.7.11.220.482
3r8zZ63Cyclin-dependent kinase 22.7.11.220.482
1di8DTQCyclin-dependent kinase 22.7.11.220.481
3r8pZ46Cyclin-dependent kinase 22.7.11.220.481
4fkg4CKCyclin-dependent kinase 22.7.11.220.481
3lfqA28Cyclin-dependent kinase 22.7.11.220.480
4lyn1YGCyclin-dependent kinase 22.7.11.220.480
2c69CT8Cyclin-dependent kinase 22.7.11.220.479
2wpa889Cyclin-dependent kinase 22.7.11.220.479
3ql8X01Cyclin-dependent kinase 22.7.11.220.479
3ti1B49Cyclin-dependent kinase 22.7.11.220.479
3r8vZ62Cyclin-dependent kinase 22.7.11.220.478
4eok4SPCyclin-dependent kinase 22.7.11.220.478
3r7eX88Cyclin-dependent kinase 22.7.11.220.477
1oiuN76Cyclin-dependent kinase 22.7.11.220.476
3r7vZ02Cyclin-dependent kinase 22.7.11.220.476
3rahO1ZCyclin-dependent kinase 22.7.11.220.476
4ek816KCyclin-dependent kinase 22.7.11.220.476
3r1yX76Cyclin-dependent kinase 22.7.11.220.475
4fkt48KCyclin-dependent kinase 22.7.11.220.475
1h1q2A6Cyclin-dependent kinase 22.7.11.220.474
1h0w207Cyclin-dependent kinase 22.7.11.220.473
3qziX72Cyclin-dependent kinase 22.7.11.220.473
4acm7YGCyclin-dependent kinase 22.7.11.220.473
2bhhRYUCyclin-dependent kinase 22.7.11.220.472
1pxlCK4Cyclin-dependent kinase 22.7.11.220.470
1vyzN5BCyclin-dependent kinase 22.7.11.220.470
3lfsA07Cyclin-dependent kinase 22.7.11.220.470
3rzb02ZCyclin-dependent kinase 22.7.11.220.470
2r3gSC9Cyclin-dependent kinase 22.7.11.220.469
2uznC96Cyclin-dependent kinase 22.7.11.220.469
3qqlX03Cyclin-dependent kinase 22.7.11.220.469
4eor4SPCyclin-dependent kinase 22.7.11.220.469
2duv371Cyclin-dependent kinase 22.7.11.220.468
2vtjLZ4Cyclin-dependent kinase 22.7.11.220.468
1unlRRCCyclin-dependent-like kinase 52.7.11.10.467
2iw94SPCyclin-dependent kinase 22.7.11.220.467
3rpr25ZCyclin-dependent kinase 22.7.11.220.467
4ek610KCyclin-dependent kinase 22.7.11.220.467
2vttLZDCyclin-dependent kinase 22.7.11.220.466
2b52D42Cyclin-dependent kinase 22.7.11.220.465
2btrU73Cyclin-dependent kinase 22.7.11.220.465
3dogNNNCyclin-dependent kinase 22.7.11.220.465
3qtqX35Cyclin-dependent kinase 22.7.11.220.465
2i40BLZCyclin-dependent kinase 22.7.11.220.464
1pkdUCNCyclin-dependent kinase 22.7.11.220.463
2bheBRYCyclin-dependent kinase 22.7.11.220.463
2vtsLZCCyclin-dependent kinase 22.7.11.220.463
2wxvWXVCyclin-dependent kinase 22.7.11.220.462
4fko20KCyclin-dependent kinase 22.7.11.220.462
1gii1PUCyclin-dependent kinase 22.7.11.220.461
3r9nZ68Cyclin-dependent kinase 22.7.11.220.461
4kd11QKCyclin-dependent kinase 22.7.11.220.461
1oiqHDUCyclin-dependent kinase 22.7.11.220.460
2fvdLIACyclin-dependent kinase 22.7.11.220.460
3qqhX0ACyclin-dependent kinase 22.7.11.220.460
4qmpDKISerine/threonine-protein kinase 242.7.11.10.460
4ez30S0Cyclin-dependent kinase 22.7.11.220.458
2iw6QQ2Cyclin-dependent kinase 22.7.11.220.457
2r3fSC8Cyclin-dependent kinase 22.7.11.220.457
1fvv107Cyclin-dependent kinase 22.7.11.220.455
2r3q5SCCyclin-dependent kinase 22.7.11.220.455
3rpy27ZCyclin-dependent kinase 22.7.11.220.455
1aq1STUCyclin-dependent kinase 22.7.11.220.454
1pxpCK8Cyclin-dependent kinase 22.7.11.220.454
1e9hINRCyclin-dependent kinase 22.7.11.220.453
2r3o2SCCyclin-dependent kinase 22.7.11.220.452
2w17I19Cyclin-dependent kinase 22.7.11.220.452
2wihP48Cyclin-dependent kinase 22.7.11.220.452
2c4g514Cyclin-dependent kinase 22.7.11.220.451
3r8uZ31Cyclin-dependent kinase 22.7.11.220.451
3pj8404Cyclin-dependent kinase 22.7.11.220.450
3uli1N3Cyclin-dependent kinase 22.7.11.220.449
3py0SU9Cyclin-dependent kinase 22.7.11.220.447
1r78FMDCyclin-dependent kinase 22.7.11.220.446
3my5RFZCyclin-dependent kinase 22.7.11.220.445
1oirHDYCyclin-dependent kinase 22.7.11.220.444
3qrtX14Cyclin-dependent kinase 22.7.11.220.444
3r7uX96Cyclin-dependent kinase 22.7.11.220.443
2c6iDT1Cyclin-dependent kinase 22.7.11.220.442
1pyePM1Cyclin-dependent kinase 22.7.11.220.441
2xnbY8LCyclin-dependent kinase 22.7.11.220.441
4bcnT9NCyclin-dependent kinase 22.7.11.220.441
1h1pCMGCyclin-dependent kinase 22.7.11.220.440