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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3idbANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.11

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3idbANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.111.000
4xw4ANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.668
3x2wATPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.660
4iacACPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.638
3x2uATPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.590
3x2vATPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.560
3o7lANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.545
2c1bCQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.501
4dg3ANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.495
4ekkANPRAC-alpha serine/threonine-protein kinase2.7.11.10.487
3e8eG98cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.486
2f7x4EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.484
4iakADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.484
1ydtIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.482
3vqhIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.482
1jbpADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.479
2vo7M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.476
2gu8796cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.472
5iqiGNPBifunctional AAC/APH2.3.10.472
3e8cG96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.469
4dh5ADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.469
3idcANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.468
1q8tY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.464
5bylGCPBifunctional AAC/APH2.3.10.464
4iayADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.458
3ow3SMYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.454
1kevNDPNADP-dependent isopropanol dehydrogenase1.1.1.800.449
2uzwSS4cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.449
1o6kANPRAC-beta serine/threonine-protein kinase2.7.11.10.447
1q24ATPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.446
4iazADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.441
2uzuL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.440