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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3hr4FMNNitric oxide synthase, inducible1.14.13.39

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3hr4FMNNitric oxide synthase, inducible1.14.13.391.000
2bf4FMNNADPH--cytochrome P450 reductase/0.502
1amoFMNNADPH--cytochrome P450 reductase/0.494
3ojwFMNNADPH--cytochrome P450 reductase/0.478
1ja0FMNNADPH--cytochrome P450 reductase/0.477
2bn4FMNNADPH--cytochrome P450 reductase/0.476
1ja1FMNNADPH--cytochrome P450 reductase/0.472
3ojxFMNNADPH--cytochrome P450 reductase/0.457
3qfrFMNNADPH--cytochrome P450 reductase/0.442