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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3hgrFMN12-oxophytodienoate reductase 11.3.1.42

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3hgrFMN12-oxophytodienoate reductase 11.3.1.421.000
1icpFMN12-oxophytodienoate reductase 11.3.1.420.667
1icsFMN12-oxophytodienoate reductase 11.3.1.420.665
1icqFMN12-oxophytodienoate reductase 11.3.1.420.659
3hgoFMN12-oxophytodienoate reductase 31.3.1.420.602
1vjiFMN12-oxophytodienoate reductase 11.3.1.420.596
1vyrFMNPentaerythritol tetranitrate reductase/0.596
3hgsFMN12-oxophytodienoate reductase 31.3.1.420.596
1h50FMNPentaerythritol tetranitrate reductase/0.595
4tmbFMNOld yellow enzyme/0.591
4rnvFMNNADPH dehydrogenase 11.6.99.10.589
3f03FMNPentaerythritol tetranitrate reductase/0.584
1q45FMN12-oxophytodienoate reductase 31.3.1.420.582
2hs8FMN12-oxophytodienoate reductase 31.3.1.420.582
3p82FMNPentaerythritol tetranitrate reductase/0.576
3p74FMNPentaerythritol tetranitrate reductase/0.573
1h63FMNPentaerythritol tetranitrate reductase/0.568
2q3rFMN12-oxophytodienoate reductase 11.3.1.420.563
2abbFMNPentaerythritol tetranitrate reductase/0.544
3p84FMNPentaerythritol tetranitrate reductase/0.540
4jicFMNGTN Reductase/0.539
3p67FMNPentaerythritol tetranitrate reductase/0.538
3p8iFMNPentaerythritol tetranitrate reductase/0.537
2hs6FMN12-oxophytodienoate reductase 31.3.1.420.534
4rnuFMNNADPH dehydrogenase 11.6.99.10.532
3tjlFMNNADPH dehydrogenase/0.527
3p8jFMNPentaerythritol tetranitrate reductase/0.523
3p62FMNPentaerythritol tetranitrate reductase/0.519
3gkaFMNN-ethylmaleimide reductase/0.517
1bwlFMNNADPH dehydrogenase 11.6.99.10.515
1h51FMNPentaerythritol tetranitrate reductase/0.510
4df2FMNNADPH dehydrogenase/0.509
2q3oFMN12-oxophytodienoate reductase 31.3.1.420.507
4m5pFMNNADPH dehydrogenase/0.507
4rnwFMNNADPH dehydrogenase 11.6.99.10.505
3atzFMNProstaglandin F2a synthase/0.503
4a3uFMNNADH:flavin oxidoreductase/NADH oxidase/0.499
4qaiFMNNADPH dehydrogenase/0.499
1bwkFMNNADPH dehydrogenase 11.6.99.10.497
4h6kFMNNADPH dehydrogenase 11.6.99.10.497
3l5lFMNXenobiotic reductase/0.495
4tmcFMNOld yellow enzyme/0.491
4awtFMNNADH:flavin oxidoreductase Sye1/0.489
4e2dFMNDehydrogenase/0.488
4e2bFMNDehydrogenase/0.487
2gouFMNNADH:flavin oxidoreductase Sye1/0.479
1oyaFMNNADPH dehydrogenase 11.6.99.10.477
1oycFMNNADPH dehydrogenase 11.6.99.10.476
4uthFMNXenobiotic reductase/0.472
1qbgFADNAD(P)H dehydrogenase [quinone] 11.6.5.20.468
4k7yFMNNADPH dehydrogenase 11.6.99.10.468
4utkFNRXenobiotic reductase/0.468
4utlFNRXenobiotic reductase/0.468
3atyFMNProstaglandin F2a synthase/0.466
2gqaFMNNADH:flavin oxidoreductase Sye1/0.460
1d4aFADNAD(P)H dehydrogenase [quinone] 11.6.5.20.451
1z44FMNNADPH dehydrogenase/0.451
4qnwFMNChanoclavine-I aldehyde reductase easA/0.450
3n19FNRXenobiotic reductase/0.448
4b5nFMNNAD(P)H:flavin oxidoreductase Sye4/0.448
4fj1NAP17beta-hydroxysteroid dehydrogenase/0.448
4rnxFMNNADPH dehydrogenase 11.6.99.10.445
2eixFADNADH-cytochrome b5 reductase/0.443
4yryFADGlutamate synthase, beta subunit/0.443
5a4kFADNAD(P)H dehydrogenase [quinone] 11.6.5.20.443