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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3hgoFMN12-oxophytodienoate reductase 31.3.1.42

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3hgoFMN12-oxophytodienoate reductase 31.3.1.421.000
1q45FMN12-oxophytodienoate reductase 31.3.1.420.627
2hs8FMN12-oxophytodienoate reductase 31.3.1.420.626
3hgsFMN12-oxophytodienoate reductase 31.3.1.420.621
1icpFMN12-oxophytodienoate reductase 11.3.1.420.610
1icqFMN12-oxophytodienoate reductase 11.3.1.420.594
1icsFMN12-oxophytodienoate reductase 11.3.1.420.578
3hgrFMN12-oxophytodienoate reductase 11.3.1.420.568
4tmbFMNOld yellow enzyme/0.568
1vjiFMN12-oxophytodienoate reductase 11.3.1.420.549
1h63FMNPentaerythritol tetranitrate reductase/0.548
2abbFMNPentaerythritol tetranitrate reductase/0.547
3f03FMNPentaerythritol tetranitrate reductase/0.546
1vyrFMNPentaerythritol tetranitrate reductase/0.543
1h50FMNPentaerythritol tetranitrate reductase/0.541
2q3oFMN12-oxophytodienoate reductase 31.3.1.420.541
3p74FMNPentaerythritol tetranitrate reductase/0.540
4rnvFMNNADPH dehydrogenase 11.6.99.10.536
2hs6FMN12-oxophytodienoate reductase 31.3.1.420.535
4rnuFMNNADPH dehydrogenase 11.6.99.10.532
3p82FMNPentaerythritol tetranitrate reductase/0.527
4jicFMNGTN Reductase/0.517
2q3rFMN12-oxophytodienoate reductase 11.3.1.420.507
4e2bFMNDehydrogenase/0.497
3atzFMNProstaglandin F2a synthase/0.493
4e2dFMNDehydrogenase/0.491
3p62FMNPentaerythritol tetranitrate reductase/0.486
3atyFMNProstaglandin F2a synthase/0.481
4m5pFMNNADPH dehydrogenase/0.480
1h51FMNPentaerythritol tetranitrate reductase/0.479
4a3uFMNNADH:flavin oxidoreductase/NADH oxidase/0.478
3gkaFMNN-ethylmaleimide reductase/0.477
3p67FMNPentaerythritol tetranitrate reductase/0.477
3tjlFMNNADPH dehydrogenase/0.477
4rnwFMNNADPH dehydrogenase 11.6.99.10.477
3p84FMNPentaerythritol tetranitrate reductase/0.476
3l5lFMNXenobiotic reductase/0.473
1bwkFMNNADPH dehydrogenase 11.6.99.10.466
1oycFMNNADPH dehydrogenase 11.6.99.10.466
3p8jFMNPentaerythritol tetranitrate reductase/0.464
1oyaFMNNADPH dehydrogenase 11.6.99.10.462
1z44FMNNADPH dehydrogenase/0.462
4qnwFMNChanoclavine-I aldehyde reductase easA/0.456
5a4kFADNAD(P)H dehydrogenase [quinone] 11.6.5.20.451
3p8iFMNPentaerythritol tetranitrate reductase/0.449
4h6kFMNNADPH dehydrogenase 11.6.99.10.449
4utlFNRXenobiotic reductase/0.449
4k7yFMNNADPH dehydrogenase 11.6.99.10.448
4utkFNRXenobiotic reductase/0.442
1x1aSAMC-20 methyltransferase/0.440
4df2FMNNADPH dehydrogenase/0.440