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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3fne8PCEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.9

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3fne8PCEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.91.000
2x23TCUEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.543
3fnhJPJEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.528
5coqTCUEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.519
5cp8TCUEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.516
2ol4JPNEnoyl-ACP reductase/0.500
4tzk641Enoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.497
2nsd4PIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.489
2b378PSEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.478
3fnfJPMEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.473
4r20AERCytochrome P450 family 17 polypeptide 2/0.468
4j6cSTRCytochrome P450 monooxygenase/0.460
1zsnTN2Enoyl-ACP reductase/0.459
2b365PPEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.458
1d3gBREDihydroorotate dehydrogenase (quinone), mitochondrial1.3.5.20.457
2c0cNAPProstaglandin reductase 310.455
4tzt468Enoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.454
4j6bPLOCytochrome P450 monooxygenase/0.453
4trj665Enoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.453
1sqi8694-hydroxyphenylpyruvate dioxygenase/0.452
3fcoIIGCorticosteroid 11-beta-dehydrogenase isozyme 11.1.1.1460.451
3uic09TEnoyl-[acyl-carrier-protein] reductase [NADH]/0.451
4ejn0R4RAC-alpha serine/threonine-protein kinase2.7.11.10.451
1y5rC0RCorticosteroid 11-beta-dehydrogenase isozyme 11.1.1.1460.450
3gw9VNILanosterol 14-alpha-demethylase/0.447
2b35TCLEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.445
4g3jVNTLanosterol 14-alpha-demethylase/0.445
4j6dTESCytochrome P450 monooxygenase/0.444
4u2lSFDCholesterol oxidase1.1.3.60.441
3mg3ECHOrange carotenoid-binding protein/0.440